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New Insights Into Drug Repurposing for COVID-19 Using Deep Learning

The coronavirus disease 2019 (COVID-19) has continued to spread worldwide since late 2019. To expedite the process of providing treatment to those who have contracted the disease and to ensure the accessibility of effective drugs, numerous strategies have been implemented to find potential anti-COVI...

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Detalles Bibliográficos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IEEE 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8843052/
https://www.ncbi.nlm.nih.gov/pubmed/34546931
http://dx.doi.org/10.1109/TNNLS.2021.3111745
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description The coronavirus disease 2019 (COVID-19) has continued to spread worldwide since late 2019. To expedite the process of providing treatment to those who have contracted the disease and to ensure the accessibility of effective drugs, numerous strategies have been implemented to find potential anti-COVID-19 drugs in a short span of time. Motivated by this critical global challenge, in this review, we detail approaches that have been used for drug repurposing for COVID-19 and suggest improvements to the existing deep learning (DL) approach to identify and repurpose drugs to treat this complex disease. By optimizing hyperparameter settings, deploying suitable activation functions, and designing optimization algorithms, the improved DL approach will be able to perform feature extraction from quality big data, turning the traditional DL approach, referred to as a “black box,” which generalizes and learns the transmitted data, into a “glass box” that will have the interpretability of its rationale while maintaining a high level of prediction accuracy. When adopted for drug repurposing for COVID-19, this improved approach will create a new generation of DL approaches that can establish a cause and effect relationship as to why the repurposed drugs are suitable for treating COVID-19. Its ability can also be extended to repurpose drugs for other complex diseases, develop appropriate treatment strategies for new diseases, and provide precision medical treatment to patients, thus paving the way to discover new drugs that can potentially be effective for treating COVID-19.
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spelling pubmed-88430522022-05-13 New Insights Into Drug Repurposing for COVID-19 Using Deep Learning IEEE Trans Neural Netw Learn Syst Article The coronavirus disease 2019 (COVID-19) has continued to spread worldwide since late 2019. To expedite the process of providing treatment to those who have contracted the disease and to ensure the accessibility of effective drugs, numerous strategies have been implemented to find potential anti-COVID-19 drugs in a short span of time. Motivated by this critical global challenge, in this review, we detail approaches that have been used for drug repurposing for COVID-19 and suggest improvements to the existing deep learning (DL) approach to identify and repurpose drugs to treat this complex disease. By optimizing hyperparameter settings, deploying suitable activation functions, and designing optimization algorithms, the improved DL approach will be able to perform feature extraction from quality big data, turning the traditional DL approach, referred to as a “black box,” which generalizes and learns the transmitted data, into a “glass box” that will have the interpretability of its rationale while maintaining a high level of prediction accuracy. When adopted for drug repurposing for COVID-19, this improved approach will create a new generation of DL approaches that can establish a cause and effect relationship as to why the repurposed drugs are suitable for treating COVID-19. Its ability can also be extended to repurpose drugs for other complex diseases, develop appropriate treatment strategies for new diseases, and provide precision medical treatment to patients, thus paving the way to discover new drugs that can potentially be effective for treating COVID-19. IEEE 2021-09-21 /pmc/articles/PMC8843052/ /pubmed/34546931 http://dx.doi.org/10.1109/TNNLS.2021.3111745 Text en This article is free to access and download, along with rights for full text and data mining, re-use and analysis.
spellingShingle Article
New Insights Into Drug Repurposing for COVID-19 Using Deep Learning
title New Insights Into Drug Repurposing for COVID-19 Using Deep Learning
title_full New Insights Into Drug Repurposing for COVID-19 Using Deep Learning
title_fullStr New Insights Into Drug Repurposing for COVID-19 Using Deep Learning
title_full_unstemmed New Insights Into Drug Repurposing for COVID-19 Using Deep Learning
title_short New Insights Into Drug Repurposing for COVID-19 Using Deep Learning
title_sort new insights into drug repurposing for covid-19 using deep learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8843052/
https://www.ncbi.nlm.nih.gov/pubmed/34546931
http://dx.doi.org/10.1109/TNNLS.2021.3111745
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