Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China

Abies yuanbaoshanensis is critically endangered and restricted in the Yuanbao Mountain of China, with no more than 900 surviving individuals. Here, we reported the complete chloroplast (cp) genome of A. yuanbaoshanensis. The complete chloroplast genome is 121,795 bp in size. In total, 114 genes were...

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Autores principales: Zhang, Yuan-Yuan, Xiang, Rui-Chen, Dong, Na-Lin, Liu, Yan-Yan, Shao, Yi-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8843196/
https://www.ncbi.nlm.nih.gov/pubmed/35174281
http://dx.doi.org/10.1080/23802359.2020.1840938
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author Zhang, Yuan-Yuan
Xiang, Rui-Chen
Dong, Na-Lin
Liu, Yan-Yan
Shao, Yi-Zhen
author_facet Zhang, Yuan-Yuan
Xiang, Rui-Chen
Dong, Na-Lin
Liu, Yan-Yan
Shao, Yi-Zhen
author_sort Zhang, Yuan-Yuan
collection PubMed
description Abies yuanbaoshanensis is critically endangered and restricted in the Yuanbao Mountain of China, with no more than 900 surviving individuals. Here, we reported the complete chloroplast (cp) genome of A. yuanbaoshanensis. The complete chloroplast genome is 121,795 bp in size. In total, 114 genes were identified, including 68 peptide-encoding genes, 35 tRNA genes, 4 rRNA genes, 6 open reading frames, and 1 pseudogene. Thirteen genes contain introns. In phylogenetic analysis, both the ML and BI analyses supported the monophyly of the genus Abies. Our study will provide potential genetic resources for further conservation and evolutionary studies of this highly endangered species.
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spelling pubmed-88431962022-02-15 Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China Zhang, Yuan-Yuan Xiang, Rui-Chen Dong, Na-Lin Liu, Yan-Yan Shao, Yi-Zhen Mitochondrial DNA B Resour Mitogenome Announcement Abies yuanbaoshanensis is critically endangered and restricted in the Yuanbao Mountain of China, with no more than 900 surviving individuals. Here, we reported the complete chloroplast (cp) genome of A. yuanbaoshanensis. The complete chloroplast genome is 121,795 bp in size. In total, 114 genes were identified, including 68 peptide-encoding genes, 35 tRNA genes, 4 rRNA genes, 6 open reading frames, and 1 pseudogene. Thirteen genes contain introns. In phylogenetic analysis, both the ML and BI analyses supported the monophyly of the genus Abies. Our study will provide potential genetic resources for further conservation and evolutionary studies of this highly endangered species. Taylor & Francis 2020-12-24 /pmc/articles/PMC8843196/ /pubmed/35174281 http://dx.doi.org/10.1080/23802359.2020.1840938 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Yuan-Yuan
Xiang, Rui-Chen
Dong, Na-Lin
Liu, Yan-Yan
Shao, Yi-Zhen
Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China
title Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China
title_full Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China
title_fullStr Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China
title_full_unstemmed Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China
title_short Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China
title_sort next-generation sequencing yields the complete chloroplast genome of abies yuanbaoshanensis, an endangered species from south china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8843196/
https://www.ncbi.nlm.nih.gov/pubmed/35174281
http://dx.doi.org/10.1080/23802359.2020.1840938
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