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Detecting disease associated biomarkers by luminescence modulating phages

Assessment of risk for a given disease and the diagnosis of diseases is often based on assays detecting biomarkers. Antibody-based biomarker-assays for diseases such as prostate cancer are often ambiguous and biomarker proteins are frequently also elevated for reasons that are unspecific. We have op...

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Autores principales: Kulpakko, Janne, Juusti, Vilhelmiina, Rannikko, Antti, Hänninen, Pekka E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8844222/
https://www.ncbi.nlm.nih.gov/pubmed/35165329
http://dx.doi.org/10.1038/s41598-022-06433-y
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author Kulpakko, Janne
Juusti, Vilhelmiina
Rannikko, Antti
Hänninen, Pekka E.
author_facet Kulpakko, Janne
Juusti, Vilhelmiina
Rannikko, Antti
Hänninen, Pekka E.
author_sort Kulpakko, Janne
collection PubMed
description Assessment of risk for a given disease and the diagnosis of diseases is often based on assays detecting biomarkers. Antibody-based biomarker-assays for diseases such as prostate cancer are often ambiguous and biomarker proteins are frequently also elevated for reasons that are unspecific. We have opted to use luminescence modulating phages for the analysis of known acute inflammatory response biomarker CRP (C-reactive protein) and biomarkers of prostate cancer in urine samples. Firstly, CRP was used to simulate the detection process in a controlled chemical environment. Secondly, we tried to classify more challenging lethal prostate cancer samples from control samples. Our unique method utilizes a special biopanning process in order to create special phages capable of capturing a dye necessary for detection and potential biomarkers. As the biomarker-molecules interfere with the phages, dye is repelled from the phage network resulting in an altered reporter luminescence. These changes can be observed with an absorbance reader and even with the naked eye. The simple method could present an alternative for screening of disease biomarkers. For prostate cancer urine samples, we achieved a sensitivity of 80% and specificity of 75% to detect Grade Group (GG) 4 and 5 prostate cancer.
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spelling pubmed-88442222022-02-16 Detecting disease associated biomarkers by luminescence modulating phages Kulpakko, Janne Juusti, Vilhelmiina Rannikko, Antti Hänninen, Pekka E. Sci Rep Article Assessment of risk for a given disease and the diagnosis of diseases is often based on assays detecting biomarkers. Antibody-based biomarker-assays for diseases such as prostate cancer are often ambiguous and biomarker proteins are frequently also elevated for reasons that are unspecific. We have opted to use luminescence modulating phages for the analysis of known acute inflammatory response biomarker CRP (C-reactive protein) and biomarkers of prostate cancer in urine samples. Firstly, CRP was used to simulate the detection process in a controlled chemical environment. Secondly, we tried to classify more challenging lethal prostate cancer samples from control samples. Our unique method utilizes a special biopanning process in order to create special phages capable of capturing a dye necessary for detection and potential biomarkers. As the biomarker-molecules interfere with the phages, dye is repelled from the phage network resulting in an altered reporter luminescence. These changes can be observed with an absorbance reader and even with the naked eye. The simple method could present an alternative for screening of disease biomarkers. For prostate cancer urine samples, we achieved a sensitivity of 80% and specificity of 75% to detect Grade Group (GG) 4 and 5 prostate cancer. Nature Publishing Group UK 2022-02-14 /pmc/articles/PMC8844222/ /pubmed/35165329 http://dx.doi.org/10.1038/s41598-022-06433-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kulpakko, Janne
Juusti, Vilhelmiina
Rannikko, Antti
Hänninen, Pekka E.
Detecting disease associated biomarkers by luminescence modulating phages
title Detecting disease associated biomarkers by luminescence modulating phages
title_full Detecting disease associated biomarkers by luminescence modulating phages
title_fullStr Detecting disease associated biomarkers by luminescence modulating phages
title_full_unstemmed Detecting disease associated biomarkers by luminescence modulating phages
title_short Detecting disease associated biomarkers by luminescence modulating phages
title_sort detecting disease associated biomarkers by luminescence modulating phages
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8844222/
https://www.ncbi.nlm.nih.gov/pubmed/35165329
http://dx.doi.org/10.1038/s41598-022-06433-y
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