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Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods

RRP12 (ribosomal RNA processing 12 homolog) is a nucleolar protein involved in the maturation and transport of eukaryotic ribosomal subunits and is a type of RNA binding protein. In recent years, considerable research has indicated that RRP12 is associated with the occurrence and development of mult...

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Autores principales: Wei, Chao, Wang, Ben, Chen, Zhong-Huo, Xiao, Han, Tang, Lei, Guan, Jia-Fu, Yuan, Rong-Fa, Yu, Xin, Hu, Zhi-Gang, Wu, Hua-Jun, Dai, Zhi, Wang, Kai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8844371/
https://www.ncbi.nlm.nih.gov/pubmed/35178347
http://dx.doi.org/10.3389/fonc.2022.812009
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author Wei, Chao
Wang, Ben
Chen, Zhong-Huo
Xiao, Han
Tang, Lei
Guan, Jia-Fu
Yuan, Rong-Fa
Yu, Xin
Hu, Zhi-Gang
Wu, Hua-Jun
Dai, Zhi
Wang, Kai
author_facet Wei, Chao
Wang, Ben
Chen, Zhong-Huo
Xiao, Han
Tang, Lei
Guan, Jia-Fu
Yuan, Rong-Fa
Yu, Xin
Hu, Zhi-Gang
Wu, Hua-Jun
Dai, Zhi
Wang, Kai
author_sort Wei, Chao
collection PubMed
description RRP12 (ribosomal RNA processing 12 homolog) is a nucleolar protein involved in the maturation and transport of eukaryotic ribosomal subunits and is a type of RNA binding protein. In recent years, considerable research has indicated that RRP12 is associated with the occurrence and development of multiple cancers. However, there is no research on RRP12 in hepatocellular carcinoma. Herein, we aimed to explore the role and significance of RRP12 in hepatocellular carcinoma.We used the TIMER and GEPIA databases to perform pan-cancer analyses of RRP12. The impact of RRP12 on the prognosis was analyzed through the GEPIA database. The relationship between RRP12 and immune cell infiltration was investigated by TIMER and GEPIA databases. Moreover, the expression of RRP12 in various liver cancer cells was evaluated by Western Blot to determine the cell line for the next experiment. Scratch test, Transwell test, and Edu tests were applied to validate the effects of RRP12 on the function of liver cancer cells. And the data were statistically analyzed.Pan-cancer analysis found that RPP12 was significantly upregulated in many cancers. Moreover, the prognostic analysis revealed that the difference in the expression of RRP12 has statistical significance for the overall survival rate and disease-free survival rate of liver cancer patients. In order to analyze the correlation between the expression level of RRP12 and clinical parameters, it was found that there was a significant negative correlation with tumor stage, tumor grade and tumor size. Univariate and multivariate analysis showed that RRP12 could be used as an independent prognostic factor for patients with hepatocellular carcinoma. Cellular experiments have proved that knocking down RRP12 can inhibit the proliferation, invasion, and metastasis of liver cancer cells.Therefore, RRP12 significantly affects the occurrence and development of HCC. Hence, RRP12 can become a potential target and prognostic biomarker for the treatment of hepatocellular carcinoma.
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spelling pubmed-88443712022-02-16 Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods Wei, Chao Wang, Ben Chen, Zhong-Huo Xiao, Han Tang, Lei Guan, Jia-Fu Yuan, Rong-Fa Yu, Xin Hu, Zhi-Gang Wu, Hua-Jun Dai, Zhi Wang, Kai Front Oncol Oncology RRP12 (ribosomal RNA processing 12 homolog) is a nucleolar protein involved in the maturation and transport of eukaryotic ribosomal subunits and is a type of RNA binding protein. In recent years, considerable research has indicated that RRP12 is associated with the occurrence and development of multiple cancers. However, there is no research on RRP12 in hepatocellular carcinoma. Herein, we aimed to explore the role and significance of RRP12 in hepatocellular carcinoma.We used the TIMER and GEPIA databases to perform pan-cancer analyses of RRP12. The impact of RRP12 on the prognosis was analyzed through the GEPIA database. The relationship between RRP12 and immune cell infiltration was investigated by TIMER and GEPIA databases. Moreover, the expression of RRP12 in various liver cancer cells was evaluated by Western Blot to determine the cell line for the next experiment. Scratch test, Transwell test, and Edu tests were applied to validate the effects of RRP12 on the function of liver cancer cells. And the data were statistically analyzed.Pan-cancer analysis found that RPP12 was significantly upregulated in many cancers. Moreover, the prognostic analysis revealed that the difference in the expression of RRP12 has statistical significance for the overall survival rate and disease-free survival rate of liver cancer patients. In order to analyze the correlation between the expression level of RRP12 and clinical parameters, it was found that there was a significant negative correlation with tumor stage, tumor grade and tumor size. Univariate and multivariate analysis showed that RRP12 could be used as an independent prognostic factor for patients with hepatocellular carcinoma. Cellular experiments have proved that knocking down RRP12 can inhibit the proliferation, invasion, and metastasis of liver cancer cells.Therefore, RRP12 significantly affects the occurrence and development of HCC. Hence, RRP12 can become a potential target and prognostic biomarker for the treatment of hepatocellular carcinoma. Frontiers Media S.A. 2022-02-01 /pmc/articles/PMC8844371/ /pubmed/35178347 http://dx.doi.org/10.3389/fonc.2022.812009 Text en Copyright © 2022 Wei, Wang, Chen, Xiao, Tang, Guan, Yuan, Yu, Hu, Wu, Dai and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Wei, Chao
Wang, Ben
Chen, Zhong-Huo
Xiao, Han
Tang, Lei
Guan, Jia-Fu
Yuan, Rong-Fa
Yu, Xin
Hu, Zhi-Gang
Wu, Hua-Jun
Dai, Zhi
Wang, Kai
Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods
title Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods
title_full Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods
title_fullStr Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods
title_full_unstemmed Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods
title_short Validating RRP12 Expression and Its Prognostic Significance in HCC Based on Data Mining and Bioinformatics Methods
title_sort validating rrp12 expression and its prognostic significance in hcc based on data mining and bioinformatics methods
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8844371/
https://www.ncbi.nlm.nih.gov/pubmed/35178347
http://dx.doi.org/10.3389/fonc.2022.812009
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