Cargando…
Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes
BACKGROUND: Glycolysis is closely associated with tumor progression, but the roles of lncRNAs in glycolysis have not been comprehensively investigated in lung adenocarcinoma (LUAD). This study is aimed at studying the possible mechanisms of glycolysis-related lncRNAs in tumor development and providi...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8845143/ https://www.ncbi.nlm.nih.gov/pubmed/35178454 http://dx.doi.org/10.1155/2022/7587398 |
_version_ | 1784651608692359168 |
---|---|
author | Cao, Peng Zhao, Bo Xiao, Yajie Hu, Shan Kong, Kangle Han, Peng Yue, Jiaqi Deng, Yu Zhao, Zhikun Wu, Dongfang Zhang, Lu Li, Fan |
author_facet | Cao, Peng Zhao, Bo Xiao, Yajie Hu, Shan Kong, Kangle Han, Peng Yue, Jiaqi Deng, Yu Zhao, Zhikun Wu, Dongfang Zhang, Lu Li, Fan |
author_sort | Cao, Peng |
collection | PubMed |
description | BACKGROUND: Glycolysis is closely associated with tumor progression, but the roles of lncRNAs in glycolysis have not been comprehensively investigated in lung adenocarcinoma (LUAD). This study is aimed at studying the possible mechanisms of glycolysis-related lncRNAs in tumor development and providing a guidance for targeted therapy. METHODS: Unsupervised consensus clustering was used to identify molecular subtypes. Gene enrichment analysis was applied to screen important pathways involved in tumor progression. A series of immune analysis was performed to assess immune infiltration. Critical transcription factors (TFs) interacting with lncRNAs were selected by Pearson correlation analysis. A first-order partial correlation analysis was implemented to identify critical lncRNAs with prognostic significance. RESULTS: Three molecular subtypes (C1, C2, and C3) were identified with distinct overall survival. Three subtypes showed differential immune infiltration, and C3 subtype was the optimal for immunotherapy treatment. Ten lncRNA-TF pairs among four glycolysis-related lncRNAs (FTX, LINC00472, PSMA3-AS1, and SNHG14) and six TFs (FOXP1, SP1, MYC, FOXM1, HIF1A, and FOS) were involved in tumor progression. We identified four critical glycolysis-related lncRNAs significantly associated with prognosis. CONCLUSIONS: This study identified three molecular subtypes that could guide personalized therapy. The four-lncRNA prognostic model can serve as an indicator for predicting prognosis or early screening of lung adenocarcinoma patients. The current results improve the understanding of the relation between lncRNAs and glycolysis. |
format | Online Article Text |
id | pubmed-8845143 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-88451432022-02-16 Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes Cao, Peng Zhao, Bo Xiao, Yajie Hu, Shan Kong, Kangle Han, Peng Yue, Jiaqi Deng, Yu Zhao, Zhikun Wu, Dongfang Zhang, Lu Li, Fan Biomed Res Int Research Article BACKGROUND: Glycolysis is closely associated with tumor progression, but the roles of lncRNAs in glycolysis have not been comprehensively investigated in lung adenocarcinoma (LUAD). This study is aimed at studying the possible mechanisms of glycolysis-related lncRNAs in tumor development and providing a guidance for targeted therapy. METHODS: Unsupervised consensus clustering was used to identify molecular subtypes. Gene enrichment analysis was applied to screen important pathways involved in tumor progression. A series of immune analysis was performed to assess immune infiltration. Critical transcription factors (TFs) interacting with lncRNAs were selected by Pearson correlation analysis. A first-order partial correlation analysis was implemented to identify critical lncRNAs with prognostic significance. RESULTS: Three molecular subtypes (C1, C2, and C3) were identified with distinct overall survival. Three subtypes showed differential immune infiltration, and C3 subtype was the optimal for immunotherapy treatment. Ten lncRNA-TF pairs among four glycolysis-related lncRNAs (FTX, LINC00472, PSMA3-AS1, and SNHG14) and six TFs (FOXP1, SP1, MYC, FOXM1, HIF1A, and FOS) were involved in tumor progression. We identified four critical glycolysis-related lncRNAs significantly associated with prognosis. CONCLUSIONS: This study identified three molecular subtypes that could guide personalized therapy. The four-lncRNA prognostic model can serve as an indicator for predicting prognosis or early screening of lung adenocarcinoma patients. The current results improve the understanding of the relation between lncRNAs and glycolysis. Hindawi 2022-02-07 /pmc/articles/PMC8845143/ /pubmed/35178454 http://dx.doi.org/10.1155/2022/7587398 Text en Copyright © 2022 Peng Cao et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Cao, Peng Zhao, Bo Xiao, Yajie Hu, Shan Kong, Kangle Han, Peng Yue, Jiaqi Deng, Yu Zhao, Zhikun Wu, Dongfang Zhang, Lu Li, Fan Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes |
title | Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes |
title_full | Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes |
title_fullStr | Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes |
title_full_unstemmed | Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes |
title_short | Understanding the Critical Role of Glycolysis-Related lncRNAs in Lung Adenocarcinoma Based on Three Molecular Subtypes |
title_sort | understanding the critical role of glycolysis-related lncrnas in lung adenocarcinoma based on three molecular subtypes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8845143/ https://www.ncbi.nlm.nih.gov/pubmed/35178454 http://dx.doi.org/10.1155/2022/7587398 |
work_keys_str_mv | AT caopeng understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT zhaobo understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT xiaoyajie understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT hushan understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT kongkangle understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT hanpeng understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT yuejiaqi understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT dengyu understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT zhaozhikun understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT wudongfang understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT zhanglu understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes AT lifan understandingthecriticalroleofglycolysisrelatedlncrnasinlungadenocarcinomabasedonthreemolecularsubtypes |