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Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning

Coronavirus 2 (SARS-CoV-2), often known by the name COVID-19, is a type of acute respiratory syndrome that has had a significant influence on both economy and health infrastructure worldwide. This novel virus is diagnosed utilising a conventional method known as the RT-PCR (Reverse Transcription Pol...

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Autores principales: Chadaga, Krishnaraj, Chakraborty, Chinmay, Prabhu, Srikanth, Umakanth, Shashikiran, Bhat, Vivekananda, Sampathila, Niranjana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Nature Singapore 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8846962/
https://www.ncbi.nlm.nih.gov/pubmed/35133633
http://dx.doi.org/10.1007/s12539-021-00499-4
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author Chadaga, Krishnaraj
Chakraborty, Chinmay
Prabhu, Srikanth
Umakanth, Shashikiran
Bhat, Vivekananda
Sampathila, Niranjana
author_facet Chadaga, Krishnaraj
Chakraborty, Chinmay
Prabhu, Srikanth
Umakanth, Shashikiran
Bhat, Vivekananda
Sampathila, Niranjana
author_sort Chadaga, Krishnaraj
collection PubMed
description Coronavirus 2 (SARS-CoV-2), often known by the name COVID-19, is a type of acute respiratory syndrome that has had a significant influence on both economy and health infrastructure worldwide. This novel virus is diagnosed utilising a conventional method known as the RT-PCR (Reverse Transcription Polymerase Chain Reaction) test. This approach, however, produces a lot of false-negative and erroneous outcomes. According to recent studies, COVID-19 can also be diagnosed using X-rays, CT scans, blood tests and cough sounds. In this article, we use blood tests and machine learning to predict the diagnosis of this deadly virus. We also present an extensive review of various existing machine-learning applications that diagnose COVID-19 from clinical and laboratory markers. Four different classifiers along with a technique called Synthetic Minority Oversampling Technique (SMOTE) were used for classification. Shapley Additive Explanations (SHAP) method was utilized to calculate the gravity of each feature and it was found that eosinophils, monocytes, leukocytes and platelets were the most critical blood parameters that distinguished COVID-19 infection for our dataset. These classifiers can be utilized in conjunction with RT-PCR tests to improve sensitivity and in emergency situations such as a pandemic outbreak that might happen due to new strains of the virus. The positive results indicate the prospective use of an automated framework that could help clinicians and medical personnel diagnose and screen patients. GRAPHICAL ABSTRACT: [Image: see text]
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spelling pubmed-88469622022-02-18 Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning Chadaga, Krishnaraj Chakraborty, Chinmay Prabhu, Srikanth Umakanth, Shashikiran Bhat, Vivekananda Sampathila, Niranjana Interdiscip Sci Original Research Article Coronavirus 2 (SARS-CoV-2), often known by the name COVID-19, is a type of acute respiratory syndrome that has had a significant influence on both economy and health infrastructure worldwide. This novel virus is diagnosed utilising a conventional method known as the RT-PCR (Reverse Transcription Polymerase Chain Reaction) test. This approach, however, produces a lot of false-negative and erroneous outcomes. According to recent studies, COVID-19 can also be diagnosed using X-rays, CT scans, blood tests and cough sounds. In this article, we use blood tests and machine learning to predict the diagnosis of this deadly virus. We also present an extensive review of various existing machine-learning applications that diagnose COVID-19 from clinical and laboratory markers. Four different classifiers along with a technique called Synthetic Minority Oversampling Technique (SMOTE) were used for classification. Shapley Additive Explanations (SHAP) method was utilized to calculate the gravity of each feature and it was found that eosinophils, monocytes, leukocytes and platelets were the most critical blood parameters that distinguished COVID-19 infection for our dataset. These classifiers can be utilized in conjunction with RT-PCR tests to improve sensitivity and in emergency situations such as a pandemic outbreak that might happen due to new strains of the virus. The positive results indicate the prospective use of an automated framework that could help clinicians and medical personnel diagnose and screen patients. GRAPHICAL ABSTRACT: [Image: see text] Springer Nature Singapore 2022-02-08 2022 /pmc/articles/PMC8846962/ /pubmed/35133633 http://dx.doi.org/10.1007/s12539-021-00499-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Research Article
Chadaga, Krishnaraj
Chakraborty, Chinmay
Prabhu, Srikanth
Umakanth, Shashikiran
Bhat, Vivekananda
Sampathila, Niranjana
Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning
title Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning
title_full Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning
title_fullStr Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning
title_full_unstemmed Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning
title_short Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning
title_sort clinical and laboratory approach to diagnose covid-19 using machine learning
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8846962/
https://www.ncbi.nlm.nih.gov/pubmed/35133633
http://dx.doi.org/10.1007/s12539-021-00499-4
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