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Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker
Long noncoding RNAs (lncRNAs) are a novel class of potential biomarkers and therapeutic targets for the treatment of neoplasms. The purpose of this study was to explore the expression profile, potential functions, and diagnostic and clinical significance of lncRNAs in sinonasal inverted papilloma (S...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847611/ https://www.ncbi.nlm.nih.gov/pubmed/35186045 http://dx.doi.org/10.3389/fgene.2022.831759 |
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author | He, Hanyi Wang, Xinlu Lu, Yueyue Lin, Xiaojiang Li, Yuandong Li, Yong Lin, Zhihong Ma, Zhiqi Cao, Xiaolin Teng, Yaoshu |
author_facet | He, Hanyi Wang, Xinlu Lu, Yueyue Lin, Xiaojiang Li, Yuandong Li, Yong Lin, Zhihong Ma, Zhiqi Cao, Xiaolin Teng, Yaoshu |
author_sort | He, Hanyi |
collection | PubMed |
description | Long noncoding RNAs (lncRNAs) are a novel class of potential biomarkers and therapeutic targets for the treatment of neoplasms. The purpose of this study was to explore the expression profile, potential functions, and diagnostic and clinical significance of lncRNAs in sinonasal inverted papilloma (SNIP). The expression profiles of lncRNAs and mRNAs were analyzed using a microarray. The potential functions and clinical implications of specific lncRNAs were further analyzed by bioinformatics and statistical methods. Microarray analysis identified 1,668 significantly upregulated and 1,767 downregulated lncRNAs in SNIP. Several mRNAs coexpressed with lncRNAs were enriched in some biological processes and cellular signaling pathways related to tumorigenesis. Lnc-AKTIP might interact with a variety of tumor-associated proteins and transcription factors, such as PCBP2, IRF-1, and p53. Receiver operating characteristic curve analysis for lnc-AKTIP showed an area under the curve of 0.939. Notably, its expression level was significantly decreased in SNIP tissues versus normal tissues and was associated with SNIP staging. Lnc-AKTIP may serve as a valuable diagnostic biomarker and a therapeutic target for SNIP. |
format | Online Article Text |
id | pubmed-8847611 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88476112022-02-17 Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker He, Hanyi Wang, Xinlu Lu, Yueyue Lin, Xiaojiang Li, Yuandong Li, Yong Lin, Zhihong Ma, Zhiqi Cao, Xiaolin Teng, Yaoshu Front Genet Genetics Long noncoding RNAs (lncRNAs) are a novel class of potential biomarkers and therapeutic targets for the treatment of neoplasms. The purpose of this study was to explore the expression profile, potential functions, and diagnostic and clinical significance of lncRNAs in sinonasal inverted papilloma (SNIP). The expression profiles of lncRNAs and mRNAs were analyzed using a microarray. The potential functions and clinical implications of specific lncRNAs were further analyzed by bioinformatics and statistical methods. Microarray analysis identified 1,668 significantly upregulated and 1,767 downregulated lncRNAs in SNIP. Several mRNAs coexpressed with lncRNAs were enriched in some biological processes and cellular signaling pathways related to tumorigenesis. Lnc-AKTIP might interact with a variety of tumor-associated proteins and transcription factors, such as PCBP2, IRF-1, and p53. Receiver operating characteristic curve analysis for lnc-AKTIP showed an area under the curve of 0.939. Notably, its expression level was significantly decreased in SNIP tissues versus normal tissues and was associated with SNIP staging. Lnc-AKTIP may serve as a valuable diagnostic biomarker and a therapeutic target for SNIP. Frontiers Media S.A. 2022-02-02 /pmc/articles/PMC8847611/ /pubmed/35186045 http://dx.doi.org/10.3389/fgene.2022.831759 Text en Copyright © 2022 He, Wang, Lu, Lin, Li, Li, Lin, Ma, Cao and Teng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics He, Hanyi Wang, Xinlu Lu, Yueyue Lin, Xiaojiang Li, Yuandong Li, Yong Lin, Zhihong Ma, Zhiqi Cao, Xiaolin Teng, Yaoshu Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker |
title | Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker |
title_full | Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker |
title_fullStr | Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker |
title_full_unstemmed | Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker |
title_short | Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker |
title_sort | comprehensive analysis of sinonasal inverted papilloma expression profiles identifies long non-coding rna aktip as a potential biomarker |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847611/ https://www.ncbi.nlm.nih.gov/pubmed/35186045 http://dx.doi.org/10.3389/fgene.2022.831759 |
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