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Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker

Long noncoding RNAs (lncRNAs) are a novel class of potential biomarkers and therapeutic targets for the treatment of neoplasms. The purpose of this study was to explore the expression profile, potential functions, and diagnostic and clinical significance of lncRNAs in sinonasal inverted papilloma (S...

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Autores principales: He, Hanyi, Wang, Xinlu, Lu, Yueyue, Lin, Xiaojiang, Li, Yuandong, Li, Yong, Lin, Zhihong, Ma, Zhiqi, Cao, Xiaolin, Teng, Yaoshu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847611/
https://www.ncbi.nlm.nih.gov/pubmed/35186045
http://dx.doi.org/10.3389/fgene.2022.831759
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author He, Hanyi
Wang, Xinlu
Lu, Yueyue
Lin, Xiaojiang
Li, Yuandong
Li, Yong
Lin, Zhihong
Ma, Zhiqi
Cao, Xiaolin
Teng, Yaoshu
author_facet He, Hanyi
Wang, Xinlu
Lu, Yueyue
Lin, Xiaojiang
Li, Yuandong
Li, Yong
Lin, Zhihong
Ma, Zhiqi
Cao, Xiaolin
Teng, Yaoshu
author_sort He, Hanyi
collection PubMed
description Long noncoding RNAs (lncRNAs) are a novel class of potential biomarkers and therapeutic targets for the treatment of neoplasms. The purpose of this study was to explore the expression profile, potential functions, and diagnostic and clinical significance of lncRNAs in sinonasal inverted papilloma (SNIP). The expression profiles of lncRNAs and mRNAs were analyzed using a microarray. The potential functions and clinical implications of specific lncRNAs were further analyzed by bioinformatics and statistical methods. Microarray analysis identified 1,668 significantly upregulated and 1,767 downregulated lncRNAs in SNIP. Several mRNAs coexpressed with lncRNAs were enriched in some biological processes and cellular signaling pathways related to tumorigenesis. Lnc-AKTIP might interact with a variety of tumor-associated proteins and transcription factors, such as PCBP2, IRF-1, and p53. Receiver operating characteristic curve analysis for lnc-AKTIP showed an area under the curve of 0.939. Notably, its expression level was significantly decreased in SNIP tissues versus normal tissues and was associated with SNIP staging. Lnc-AKTIP may serve as a valuable diagnostic biomarker and a therapeutic target for SNIP.
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spelling pubmed-88476112022-02-17 Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker He, Hanyi Wang, Xinlu Lu, Yueyue Lin, Xiaojiang Li, Yuandong Li, Yong Lin, Zhihong Ma, Zhiqi Cao, Xiaolin Teng, Yaoshu Front Genet Genetics Long noncoding RNAs (lncRNAs) are a novel class of potential biomarkers and therapeutic targets for the treatment of neoplasms. The purpose of this study was to explore the expression profile, potential functions, and diagnostic and clinical significance of lncRNAs in sinonasal inverted papilloma (SNIP). The expression profiles of lncRNAs and mRNAs were analyzed using a microarray. The potential functions and clinical implications of specific lncRNAs were further analyzed by bioinformatics and statistical methods. Microarray analysis identified 1,668 significantly upregulated and 1,767 downregulated lncRNAs in SNIP. Several mRNAs coexpressed with lncRNAs were enriched in some biological processes and cellular signaling pathways related to tumorigenesis. Lnc-AKTIP might interact with a variety of tumor-associated proteins and transcription factors, such as PCBP2, IRF-1, and p53. Receiver operating characteristic curve analysis for lnc-AKTIP showed an area under the curve of 0.939. Notably, its expression level was significantly decreased in SNIP tissues versus normal tissues and was associated with SNIP staging. Lnc-AKTIP may serve as a valuable diagnostic biomarker and a therapeutic target for SNIP. Frontiers Media S.A. 2022-02-02 /pmc/articles/PMC8847611/ /pubmed/35186045 http://dx.doi.org/10.3389/fgene.2022.831759 Text en Copyright © 2022 He, Wang, Lu, Lin, Li, Li, Lin, Ma, Cao and Teng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
He, Hanyi
Wang, Xinlu
Lu, Yueyue
Lin, Xiaojiang
Li, Yuandong
Li, Yong
Lin, Zhihong
Ma, Zhiqi
Cao, Xiaolin
Teng, Yaoshu
Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker
title Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker
title_full Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker
title_fullStr Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker
title_full_unstemmed Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker
title_short Comprehensive Analysis of Sinonasal Inverted Papilloma Expression Profiles Identifies Long Non-Coding RNA AKTIP as a Potential Biomarker
title_sort comprehensive analysis of sinonasal inverted papilloma expression profiles identifies long non-coding rna aktip as a potential biomarker
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847611/
https://www.ncbi.nlm.nih.gov/pubmed/35186045
http://dx.doi.org/10.3389/fgene.2022.831759
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