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Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies

In situ transmission electron microscopy (TEM) studies of dynamic events produce large quantities of data especially under the form of images. In the important case of heterogeneous catalysis, environmental TEM (ETEM) under gas and temperature allows to follow a large population of supported nanopar...

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Autores principales: Faraz, Khuram, Grenier, Thomas, Ducottet, Christophe, Epicier, Thierry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847623/
https://www.ncbi.nlm.nih.gov/pubmed/35169206
http://dx.doi.org/10.1038/s41598-022-06308-2
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author Faraz, Khuram
Grenier, Thomas
Ducottet, Christophe
Epicier, Thierry
author_facet Faraz, Khuram
Grenier, Thomas
Ducottet, Christophe
Epicier, Thierry
author_sort Faraz, Khuram
collection PubMed
description In situ transmission electron microscopy (TEM) studies of dynamic events produce large quantities of data especially under the form of images. In the important case of heterogeneous catalysis, environmental TEM (ETEM) under gas and temperature allows to follow a large population of supported nanoparticles (NPs) evolving under reactive conditions. Interpreting properly large image sequences gives precious information on the catalytic properties of the active phase by identifying causes for its deactivation. To perform a quantitative, objective and robust treatment, we propose an automatic procedure to track nanoparticles observed in Scanning ETEM (STEM in ETEM). Our approach involves deep learning and computer vision developments in multiple object tracking. At first, a registration step corrects the image displacements and misalignment inherent to the in situ acquisition. Then, a deep learning approach detects the nanoparticles on all frames of video sequences. Finally, an iterative tracking algorithm reconstructs their trajectories. This treatment allows to deduce quantitative and statistical features about their evolution or motion, such as a Brownian behavior and merging or crossing events. We treat the case of in situ calcination of palladium (oxide) / delta-alumina, where the present approach allows a discussion of operating processes such as Ostwald ripening or NP aggregative coalescence.
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spelling pubmed-88476232022-02-17 Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies Faraz, Khuram Grenier, Thomas Ducottet, Christophe Epicier, Thierry Sci Rep Article In situ transmission electron microscopy (TEM) studies of dynamic events produce large quantities of data especially under the form of images. In the important case of heterogeneous catalysis, environmental TEM (ETEM) under gas and temperature allows to follow a large population of supported nanoparticles (NPs) evolving under reactive conditions. Interpreting properly large image sequences gives precious information on the catalytic properties of the active phase by identifying causes for its deactivation. To perform a quantitative, objective and robust treatment, we propose an automatic procedure to track nanoparticles observed in Scanning ETEM (STEM in ETEM). Our approach involves deep learning and computer vision developments in multiple object tracking. At first, a registration step corrects the image displacements and misalignment inherent to the in situ acquisition. Then, a deep learning approach detects the nanoparticles on all frames of video sequences. Finally, an iterative tracking algorithm reconstructs their trajectories. This treatment allows to deduce quantitative and statistical features about their evolution or motion, such as a Brownian behavior and merging or crossing events. We treat the case of in situ calcination of palladium (oxide) / delta-alumina, where the present approach allows a discussion of operating processes such as Ostwald ripening or NP aggregative coalescence. Nature Publishing Group UK 2022-02-15 /pmc/articles/PMC8847623/ /pubmed/35169206 http://dx.doi.org/10.1038/s41598-022-06308-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Faraz, Khuram
Grenier, Thomas
Ducottet, Christophe
Epicier, Thierry
Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies
title Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies
title_full Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies
title_fullStr Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies
title_full_unstemmed Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies
title_short Deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ ETEM studies
title_sort deep learning detection of nanoparticles and multiple object tracking of their dynamic evolution during in situ etem studies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847623/
https://www.ncbi.nlm.nih.gov/pubmed/35169206
http://dx.doi.org/10.1038/s41598-022-06308-2
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