Cargando…
Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis
Parallelism between evolutionary trajectories in a trait space is often seen as evidence for repeatability of phenotypic evolution, and angles between trajectories play a pivotal role in the analysis of parallelism. However, properties of angles in multidimensional spaces have not been widely apprec...
Autor principal: | |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847891/ https://www.ncbi.nlm.nih.gov/pubmed/35168376 http://dx.doi.org/10.1098/rsbl.2021.0638 |
_version_ | 1784652136621015040 |
---|---|
author | Watanabe, Junya |
author_facet | Watanabe, Junya |
author_sort | Watanabe, Junya |
collection | PubMed |
description | Parallelism between evolutionary trajectories in a trait space is often seen as evidence for repeatability of phenotypic evolution, and angles between trajectories play a pivotal role in the analysis of parallelism. However, properties of angles in multidimensional spaces have not been widely appreciated by biologists. To remedy this situation, this study provides a brief overview on geometric and statistical aspects of angles in multidimensional spaces. Under the null hypothesis that trajectory vectors have no preferred directions (i.e. uniform distribution on hypersphere), the angle between two independent vectors is concentrated around the right angle, with a more pronounced peak in a higher-dimensional space. This probability distribution is closely related to t- and beta distributions, which can be used for testing the null hypothesis concerning a pair of trajectories. A recently proposed method with eigenanalysis of a vector correlation matrix can be connected to the test of no correlation or concentration of multiple vectors, for which simple test procedures are available in the statistical literature. Concentration of vectors can also be examined by tools of directional statistics such as the Rayleigh test. These frameworks provide biologists with baselines to make statistically justified inferences for (non)parallel evolution. |
format | Online Article Text |
id | pubmed-8847891 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-88478912022-02-18 Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis Watanabe, Junya Biol Lett Special Feature Parallelism between evolutionary trajectories in a trait space is often seen as evidence for repeatability of phenotypic evolution, and angles between trajectories play a pivotal role in the analysis of parallelism. However, properties of angles in multidimensional spaces have not been widely appreciated by biologists. To remedy this situation, this study provides a brief overview on geometric and statistical aspects of angles in multidimensional spaces. Under the null hypothesis that trajectory vectors have no preferred directions (i.e. uniform distribution on hypersphere), the angle between two independent vectors is concentrated around the right angle, with a more pronounced peak in a higher-dimensional space. This probability distribution is closely related to t- and beta distributions, which can be used for testing the null hypothesis concerning a pair of trajectories. A recently proposed method with eigenanalysis of a vector correlation matrix can be connected to the test of no correlation or concentration of multiple vectors, for which simple test procedures are available in the statistical literature. Concentration of vectors can also be examined by tools of directional statistics such as the Rayleigh test. These frameworks provide biologists with baselines to make statistically justified inferences for (non)parallel evolution. The Royal Society 2022-02-16 /pmc/articles/PMC8847891/ /pubmed/35168376 http://dx.doi.org/10.1098/rsbl.2021.0638 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Special Feature Watanabe, Junya Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis |
title | Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis |
title_full | Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis |
title_fullStr | Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis |
title_full_unstemmed | Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis |
title_short | Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis |
title_sort | detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis |
topic | Special Feature |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847891/ https://www.ncbi.nlm.nih.gov/pubmed/35168376 http://dx.doi.org/10.1098/rsbl.2021.0638 |
work_keys_str_mv | AT watanabejunya detectingnonparallelevolutioninmultidimensionalspacesanglescorrelationsandeigenanalysis |