Cargando…

ExTaxsI: an exploration tool of biodiversity molecular data

BACKGROUND: The increasing availability of multi-omics data is leading to regularly revised estimates of existing biodiversity data. In particular, the molecular data enable novel species to be characterized and the information linked to those already observed to be increased with new genomics data....

Descripción completa

Detalles Bibliográficos
Autores principales:	Agostinetto, Giulia, Brusati, Alberto, Sandionigi, Anna, Chahed, Adam, Parladori, Elena, Balech, Bachir, Bruno, Antonia, Pescini, Dario, Casiraghi, Maurizio
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2022
Materias:	Technical Note
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8848311/ https://www.ncbi.nlm.nih.gov/pubmed/35077538 http://dx.doi.org/10.1093/gigascience/giab092

Ejemplares similares

Extending Association Rule Mining to Microbiome Pattern Analysis: Tools and Guidelines to Support Real Applications
por: Giulia, Agostinetto, et al.
Publicado: (2022)

Food Tracking Perspective: DNA Metabarcoding to Identify Plant Composition in Complex and Processed Food Products
por: Bruno, Antonia, et al.
Publicado: (2019)

MetaCOXI: an integrated collection of metazoan mitochondrial cytochrome oxidase subunit-I DNA sequences
por: Balech, Bachir, et al.
Publicado: (2022)

It’s a Long Way to the Tap: Microbiome and DNA-Based Omics at the Core of Drinking Water Quality
por: Bruno, Antonia, et al.
Publicado: (2022)

GFF-Ex: a genome feature extraction package
por: Rastogi, Achal, et al.
Publicado: (2014)

Exploring Changes in the Microbiota of Aedes albopictus: Comparison Among Breeding Site Water, Larvae, and Adults
por: Scolari, Francesca, et al.
Publicado: (2021)

CANGS: a user-friendly utility for processing and analyzing 454 GS-FLX data in biodiversity studies
por: Pandey, Ram Vinay, et al.
Publicado: (2010)

An ex vivo experimental system to track fluorescent nanoparticles inside skeletal muscle
por: Calderan, Laura, et al.
Publicado: (2022)

Plant biodiversity assessment through pollen DNA metabarcoding in Natura 2000 habitats (Italian Alps)
por: Leontidou, Kleopatra, et al.
Publicado: (2021)

Microbubbles as a contrast agent in grating interferometry mammography: an ex vivo proof-of-mechanism study
por: Lång, Kristina, et al.
Publicado: (2019)

Identifying disruptors of male germ cell development by small molecule screening in ex vivo gonad cultures
por: Wakeling, Stephanie I, et al.
Publicado: (2013)

The LipoDerm Method for Regeneration and Reconstruction in Plastic Surgery: A Technical Experimental Ex Vivo Note
por: Alharbi, Ziyad, et al.
Publicado: (2023)

MediPlEx - a tool to combine in silico & experimental gene expression profiles of the model legume Medicago truncatula
por: Henckel, Kolja, et al.
Publicado: (2010)

SKIOME Project: a curated collection of skin microbiome datasets enriched with study-related metadata
por: Agostinetto, Giulia, et al.
Publicado: (2022)

Tackling critical parameters in metazoan meta-barcoding experiments: a preliminary study based on coxI DNA barcode
por: Balech, Bachir, et al.
Publicado: (2018)

AXIOME: automated exploration of microbial diversity
por: Lynch, Michael DJ, et al.
Publicado: (2013)

Contamination detection and microbiome exploration with GRIMER
por: Piro, Vitor C, et al.
Publicado: (2023)

Exploring the under-investigated “microbial dark matter” of drinking water treatment plants
por: Bruno, Antonia, et al.
Publicado: (2017)

Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR
por: Waterhouse, Robert M., et al.
Publicado: (2022)

Medusa: A tool for exploring and clustering biological networks
por: Pavlopoulos, Georgios A, et al.
Publicado: (2011)

Autonomous Exploration and Mapping with RFS Occupancy-Grid SLAM
por: Ristic, Branko, et al.
Publicado: (2018)

Innovative Strategy for 3D Transfection of Primary Human Stem Cells with BMP-2 Expressing Plasmid DNA: A Clinically Translatable Strategy for Ex Vivo Gene Therapy
por: Paidikondala, Maruthibabu, et al.
Publicado: (2018)

deFUME: Dynamic exploration of functional metagenomic sequencing data
por: van der Helm, Eric, et al.
Publicado: (2015)

Robust FCS Parsing: Exploring 211,359 Public Files
por: Bras, Anne E., et al.
Publicado: (2020)

Improved co-registration of ex-vivo and in-vivo cardiovascular magnetic resonance images using heart-specific flexible 3D printed acrylic scaffold combined with non-rigid registration
por: Whitaker, John, et al.
Publicado: (2019)

MLEP: an R package for exploring the maximum likelihood estimates of penetrance parameters
por: Sugaya, Yuki
Publicado: (2012)

ARA: a flexible pipeline for automated exploration of NCBI SRA datasets
por: Maurya, Anand, et al.
Publicado: (2023)

A Pilot Study Exploring the Quadratic Nature of the Relationship of Strength to Performance among Shot Putters
por: JUDGE, LAWRENCE W., et al.
Publicado: (2013)

Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and exploration
por: McGowan, Thomas, et al.
Publicado: (2020)

MRI-Cavernosography: A New Diagnostic Tool for Erectile Dysfunction Due to Venous Leakage: A Diagnostic Chance
por: Di Serafino, Marco, et al.
Publicado: (2023)

PictureSensation – a mobile application to help the blind explore the visual world through touch and sound
por: Banf, Michael, et al.
Publicado: (2016)

EntropyExplorer: an R package for computing and comparing differential Shannon entropy, differential coefficient of variation and differential expression
por: Wang, Kai, et al.
Publicado: (2015)

Exploring breast and prostate cancer RNA-seq derived radiosensitivity with the Genomic Adjusted Radiation Dose (GARD) model
por: Nolan, Ben, et al.
Publicado: (2022)

Changes in the Drinking Water Microbiome: Effects of Water Treatments Along the Flow of Two Drinking Water Treatment Plants in a Urbanized Area, Milan (Italy)
por: Bruno, Antonia, et al.
Publicado: (2018)

Automated Flood Depth Estimates from Online Traffic Sign Images: Explorations of a Convolutional Neural Network-Based Method
por: Song, Zhiqing, et al.
Publicado: (2021)

Exploring background risk factors for fatigue crashes involving truck drivers on regional roadway networks: a case control study in Jiangxi and Shaanxi, China
por: Chen, Changkun, et al.
Publicado: (2016)

SnpHub: an easy-to-set-up web server framework for exploring large-scale genomic variation data in the post-genomic era with applications in wheat
por: Wang, Wenxi, et al.
Publicado: (2020)

Integrating Neuromonitoring in Pediatric Emergency Medicine: Exploring Two Options for Point-of-Care Electroencephalogram (pocEEG) via Patient Monitors—A Technical Note
por: Simma, Leopold, et al.
Publicado: (2023)

A Cautionary Note on the Use of Split-YFP/BiFC in Plant Protein-Protein Interaction Studies
por: Horstman, Anneke, et al.
Publicado: (2014)

Stem injection of (15)N–NH(4)NO(3) into mature Sitka spruce (Picea sitchensis)
por: Nair, Richard, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_abbhoe9p0r3sio37lhcd7cd57a