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Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images

Computed tomography (CT) is a common modality for liver diagnosis, treatment, and follow-up process. Providing accurate liver segmentation using CT images is a crucial step towards those tasks. In this paper, we propose a stacked 2-U-Nets model with three different types of skip connections. The pro...

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Autores principales: Khattab, Mahmoud Abdelazim, Liao, Iman Yi, Ooi, Ean Hin, Chong, Siang Yew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8850044/
https://www.ncbi.nlm.nih.gov/pubmed/35186116
http://dx.doi.org/10.1155/2022/8501828
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author Khattab, Mahmoud Abdelazim
Liao, Iman Yi
Ooi, Ean Hin
Chong, Siang Yew
author_facet Khattab, Mahmoud Abdelazim
Liao, Iman Yi
Ooi, Ean Hin
Chong, Siang Yew
author_sort Khattab, Mahmoud Abdelazim
collection PubMed
description Computed tomography (CT) is a common modality for liver diagnosis, treatment, and follow-up process. Providing accurate liver segmentation using CT images is a crucial step towards those tasks. In this paper, we propose a stacked 2-U-Nets model with three different types of skip connections. The proposed connections work to recover the loss of high-level features on the convolutional path of the first U-Net due to the pooling and the loss of low-level features during the upsampling path of the first U-Net. The skip connections concatenate all the features that are generated at the same level from the previous paths to the inputs of the convolutional layers in both paths of the second U-Net in a densely connected manner. We implement two versions of the model with different number of filters at each level of each U-Net by maximising the Dice similarity between the predicted liver region and that of the ground truth. The proposed models were trained with 3Dircadb public dataset that were released for Sliver and 3D liver and tumour segmentation challenges during MICCAI 2007-2008 challenge. The experimental results show that the proposed model outperformed the original U-Net and 2-U-Nets variants, and is comparable to the state-of-the-art mU-Net, DC U-Net, and Cascaded UNET.
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spelling pubmed-88500442022-02-17 Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images Khattab, Mahmoud Abdelazim Liao, Iman Yi Ooi, Ean Hin Chong, Siang Yew Comput Math Methods Med Research Article Computed tomography (CT) is a common modality for liver diagnosis, treatment, and follow-up process. Providing accurate liver segmentation using CT images is a crucial step towards those tasks. In this paper, we propose a stacked 2-U-Nets model with three different types of skip connections. The proposed connections work to recover the loss of high-level features on the convolutional path of the first U-Net due to the pooling and the loss of low-level features during the upsampling path of the first U-Net. The skip connections concatenate all the features that are generated at the same level from the previous paths to the inputs of the convolutional layers in both paths of the second U-Net in a densely connected manner. We implement two versions of the model with different number of filters at each level of each U-Net by maximising the Dice similarity between the predicted liver region and that of the ground truth. The proposed models were trained with 3Dircadb public dataset that were released for Sliver and 3D liver and tumour segmentation challenges during MICCAI 2007-2008 challenge. The experimental results show that the proposed model outperformed the original U-Net and 2-U-Nets variants, and is comparable to the state-of-the-art mU-Net, DC U-Net, and Cascaded UNET. Hindawi 2022-02-09 /pmc/articles/PMC8850044/ /pubmed/35186116 http://dx.doi.org/10.1155/2022/8501828 Text en Copyright © 2022 Mahmoud Abdelazim Khattab et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Khattab, Mahmoud Abdelazim
Liao, Iman Yi
Ooi, Ean Hin
Chong, Siang Yew
Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images
title Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images
title_full Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images
title_fullStr Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images
title_full_unstemmed Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images
title_short Compound W-Net with Fully Accumulative Residual Connections for Liver Segmentation Using CT Images
title_sort compound w-net with fully accumulative residual connections for liver segmentation using ct images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8850044/
https://www.ncbi.nlm.nih.gov/pubmed/35186116
http://dx.doi.org/10.1155/2022/8501828
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