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A machine learning model for predicting deterioration of COVID-19 inpatients

The COVID-19 pandemic has been spreading worldwide since December 2019, presenting an urgent threat to global health. Due to the limited understanding of disease progression and of the risk factors for the disease, it is a clinical challenge to predict which hospitalized patients will deteriorate. M...

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Autores principales: Noy, Omer, Coster, Dan, Metzger, Maya, Atar, Itai, Shenhar-Tsarfaty, Shani, Berliner, Shlomo, Rahav, Galia, Rogowski, Ori, Shamir, Ron
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8850417/
https://www.ncbi.nlm.nih.gov/pubmed/35173197
http://dx.doi.org/10.1038/s41598-022-05822-7
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author Noy, Omer
Coster, Dan
Metzger, Maya
Atar, Itai
Shenhar-Tsarfaty, Shani
Berliner, Shlomo
Rahav, Galia
Rogowski, Ori
Shamir, Ron
author_facet Noy, Omer
Coster, Dan
Metzger, Maya
Atar, Itai
Shenhar-Tsarfaty, Shani
Berliner, Shlomo
Rahav, Galia
Rogowski, Ori
Shamir, Ron
author_sort Noy, Omer
collection PubMed
description The COVID-19 pandemic has been spreading worldwide since December 2019, presenting an urgent threat to global health. Due to the limited understanding of disease progression and of the risk factors for the disease, it is a clinical challenge to predict which hospitalized patients will deteriorate. Moreover, several studies suggested that taking early measures for treating patients at risk of deterioration could prevent or lessen condition worsening and the need for mechanical ventilation. We developed a predictive model for early identification of patients at risk for clinical deterioration by retrospective analysis of electronic health records of COVID-19 inpatients at the two largest medical centers in Israel. Our model employs machine learning methods and uses routine clinical features such as vital signs, lab measurements, demographics, and background disease. Deterioration was defined as a high NEWS2 score adjusted to COVID-19. In the prediction of deterioration within the next 7–30 h, the model achieved an area under the ROC curve of 0.84 and an area under the precision-recall curve of 0.74. In external validation on data from a different hospital, it achieved values of 0.76 and 0.7, respectively.
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spelling pubmed-88504172022-02-17 A machine learning model for predicting deterioration of COVID-19 inpatients Noy, Omer Coster, Dan Metzger, Maya Atar, Itai Shenhar-Tsarfaty, Shani Berliner, Shlomo Rahav, Galia Rogowski, Ori Shamir, Ron Sci Rep Article The COVID-19 pandemic has been spreading worldwide since December 2019, presenting an urgent threat to global health. Due to the limited understanding of disease progression and of the risk factors for the disease, it is a clinical challenge to predict which hospitalized patients will deteriorate. Moreover, several studies suggested that taking early measures for treating patients at risk of deterioration could prevent or lessen condition worsening and the need for mechanical ventilation. We developed a predictive model for early identification of patients at risk for clinical deterioration by retrospective analysis of electronic health records of COVID-19 inpatients at the two largest medical centers in Israel. Our model employs machine learning methods and uses routine clinical features such as vital signs, lab measurements, demographics, and background disease. Deterioration was defined as a high NEWS2 score adjusted to COVID-19. In the prediction of deterioration within the next 7–30 h, the model achieved an area under the ROC curve of 0.84 and an area under the precision-recall curve of 0.74. In external validation on data from a different hospital, it achieved values of 0.76 and 0.7, respectively. Nature Publishing Group UK 2022-02-16 /pmc/articles/PMC8850417/ /pubmed/35173197 http://dx.doi.org/10.1038/s41598-022-05822-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Noy, Omer
Coster, Dan
Metzger, Maya
Atar, Itai
Shenhar-Tsarfaty, Shani
Berliner, Shlomo
Rahav, Galia
Rogowski, Ori
Shamir, Ron
A machine learning model for predicting deterioration of COVID-19 inpatients
title A machine learning model for predicting deterioration of COVID-19 inpatients
title_full A machine learning model for predicting deterioration of COVID-19 inpatients
title_fullStr A machine learning model for predicting deterioration of COVID-19 inpatients
title_full_unstemmed A machine learning model for predicting deterioration of COVID-19 inpatients
title_short A machine learning model for predicting deterioration of COVID-19 inpatients
title_sort machine learning model for predicting deterioration of covid-19 inpatients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8850417/
https://www.ncbi.nlm.nih.gov/pubmed/35173197
http://dx.doi.org/10.1038/s41598-022-05822-7
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