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Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images

A novel coronavirus (COVID-19) recently emerged as an acute respiratory syndrome, and has caused a pneumonia outbreak world-widely. As the COVID-19 continues to spread rapidly across the world, computed tomography (CT) has become essentially important for fast diagnoses. Thus, it is urgent to develo...

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Detalles Bibliográficos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IEEE 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8851430/
https://www.ncbi.nlm.nih.gov/pubmed/33705321
http://dx.doi.org/10.1109/TCBB.2021.3065361
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description A novel coronavirus (COVID-19) recently emerged as an acute respiratory syndrome, and has caused a pneumonia outbreak world-widely. As the COVID-19 continues to spread rapidly across the world, computed tomography (CT) has become essentially important for fast diagnoses. Thus, it is urgent to develop an accurate computer-aided method to assist clinicians to identify COVID-19-infected patients by CT images. Here, we have collected chest CT scans of 88 patients diagnosed with COVID-19 from hospitals of two provinces in China, 100 patients infected with bacteria pneumonia, and 86 healthy persons for comparison and modeling. Based on the data, a deep learning-based CT diagnosis system was developed to identify patients with COVID-19. The experimental results showed that our model could accurately discriminate the COVID-19 patients from the bacteria pneumonia patients with an AUC of 0.95, recall (sensitivity) of 0.96, and precision of 0.79. When integrating three types of CT images, our model achieved a recall of 0.93 with precision of 0.86 for discriminating COVID-19 patients from others. Moreover, our model could extract main lesion features, especially the ground-glass opacity (GGO), which are visually helpful for assisted diagnoses by doctors. An online server is available for online diagnoses with CT images by our server (http://biomed.nscc-gz.cn/model.php). Source codes and datasets are available at our GitHub (https://github.com/SY575/COVID19-CT).
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spelling pubmed-88514302022-05-13 Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images IEEE/ACM Trans Comput Biol Bioinform Article A novel coronavirus (COVID-19) recently emerged as an acute respiratory syndrome, and has caused a pneumonia outbreak world-widely. As the COVID-19 continues to spread rapidly across the world, computed tomography (CT) has become essentially important for fast diagnoses. Thus, it is urgent to develop an accurate computer-aided method to assist clinicians to identify COVID-19-infected patients by CT images. Here, we have collected chest CT scans of 88 patients diagnosed with COVID-19 from hospitals of two provinces in China, 100 patients infected with bacteria pneumonia, and 86 healthy persons for comparison and modeling. Based on the data, a deep learning-based CT diagnosis system was developed to identify patients with COVID-19. The experimental results showed that our model could accurately discriminate the COVID-19 patients from the bacteria pneumonia patients with an AUC of 0.95, recall (sensitivity) of 0.96, and precision of 0.79. When integrating three types of CT images, our model achieved a recall of 0.93 with precision of 0.86 for discriminating COVID-19 patients from others. Moreover, our model could extract main lesion features, especially the ground-glass opacity (GGO), which are visually helpful for assisted diagnoses by doctors. An online server is available for online diagnoses with CT images by our server (http://biomed.nscc-gz.cn/model.php). Source codes and datasets are available at our GitHub (https://github.com/SY575/COVID19-CT). IEEE 2021-03-11 /pmc/articles/PMC8851430/ /pubmed/33705321 http://dx.doi.org/10.1109/TCBB.2021.3065361 Text en This article is free to access and download, along with rights for full text and data mining, re-use and analysis.
spellingShingle Article
Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images
title Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images
title_full Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images
title_fullStr Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images
title_full_unstemmed Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images
title_short Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images
title_sort deep learning enables accurate diagnosis of novel coronavirus (covid-19) with ct images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8851430/
https://www.ncbi.nlm.nih.gov/pubmed/33705321
http://dx.doi.org/10.1109/TCBB.2021.3065361
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