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Innate immune memory and its application to artificial immune systems

The study of innate immune-based algorithms is an important research domain in Artificial Immune System (AIS), such as Dendritic Cell Algorithm (DCA), Toll-Like Receptor algorithm (TLRA). The parameters in these algorithms usually require either manually pre-defined usually provided by the immunolog...

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Autores principales: Wang, Dongmei, Liang, Yiwen, Dong, Hongbin, Tan, Chengyu, Xiao, Zhenhua, Liu, Sai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8852961/
https://www.ncbi.nlm.nih.gov/pubmed/35194317
http://dx.doi.org/10.1007/s11227-021-04295-1
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author Wang, Dongmei
Liang, Yiwen
Dong, Hongbin
Tan, Chengyu
Xiao, Zhenhua
Liu, Sai
author_facet Wang, Dongmei
Liang, Yiwen
Dong, Hongbin
Tan, Chengyu
Xiao, Zhenhua
Liu, Sai
author_sort Wang, Dongmei
collection PubMed
description The study of innate immune-based algorithms is an important research domain in Artificial Immune System (AIS), such as Dendritic Cell Algorithm (DCA), Toll-Like Receptor algorithm (TLRA). The parameters in these algorithms usually require either manually pre-defined usually provided by the immunologists, or empirically derived from the training dataset, and result in poor self-adaptation and self-learning. The fundamental reason is that the original innate immune mechanisms lack adaptive biological theory. To solve this problem, a theory called ‘Trained Immunity™ or Innate Immune Memory (IIM)™ that thinks innate immunity can also build immunological memory to enhance the immune system™s learning and adaptive reactions to the second stimulus is introduced into AIS to improve the innate immune algorithms™ adaptability. In this study, we present an overview of IIM with particular emphasis on analogies in the AIS world, and a modified DCA with an effective automated tuning mechanism based on IIM (IIM-DCA) to optimize migration threshold of DCA. The migration threshold of Dendritic Cells (DCs) determines the lifespan of the antigen collected by DCs, and directly affect the detection speed and accuracy of DCA. Experiments on real datasets show that our proposed IIM-DCA which integrates Innate Immune Memory mechanism delivers more accurate results.
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spelling pubmed-88529612022-02-18 Innate immune memory and its application to artificial immune systems Wang, Dongmei Liang, Yiwen Dong, Hongbin Tan, Chengyu Xiao, Zhenhua Liu, Sai J Supercomput Article The study of innate immune-based algorithms is an important research domain in Artificial Immune System (AIS), such as Dendritic Cell Algorithm (DCA), Toll-Like Receptor algorithm (TLRA). The parameters in these algorithms usually require either manually pre-defined usually provided by the immunologists, or empirically derived from the training dataset, and result in poor self-adaptation and self-learning. The fundamental reason is that the original innate immune mechanisms lack adaptive biological theory. To solve this problem, a theory called ‘Trained Immunity™ or Innate Immune Memory (IIM)™ that thinks innate immunity can also build immunological memory to enhance the immune system™s learning and adaptive reactions to the second stimulus is introduced into AIS to improve the innate immune algorithms™ adaptability. In this study, we present an overview of IIM with particular emphasis on analogies in the AIS world, and a modified DCA with an effective automated tuning mechanism based on IIM (IIM-DCA) to optimize migration threshold of DCA. The migration threshold of Dendritic Cells (DCs) determines the lifespan of the antigen collected by DCs, and directly affect the detection speed and accuracy of DCA. Experiments on real datasets show that our proposed IIM-DCA which integrates Innate Immune Memory mechanism delivers more accurate results. Springer US 2022-02-16 2022 /pmc/articles/PMC8852961/ /pubmed/35194317 http://dx.doi.org/10.1007/s11227-021-04295-1 Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Wang, Dongmei
Liang, Yiwen
Dong, Hongbin
Tan, Chengyu
Xiao, Zhenhua
Liu, Sai
Innate immune memory and its application to artificial immune systems
title Innate immune memory and its application to artificial immune systems
title_full Innate immune memory and its application to artificial immune systems
title_fullStr Innate immune memory and its application to artificial immune systems
title_full_unstemmed Innate immune memory and its application to artificial immune systems
title_short Innate immune memory and its application to artificial immune systems
title_sort innate immune memory and its application to artificial immune systems
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8852961/
https://www.ncbi.nlm.nih.gov/pubmed/35194317
http://dx.doi.org/10.1007/s11227-021-04295-1
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