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3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design

In this study, we performed 3D finite element simulations on the binding reaction kinetics of SARS-CoV-2 S protein (target analyte) and its corresponding immobilized antibody (ligand) in a heterogeneous microfluidic immunoassay. Two types of biosensors with two different shapes and geometries of the...

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Autores principales: Kaziz, Sameh, Saad, Yosra, Gazzah, Mohamed Hichem, Belmabrouk, Hafedh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8854486/
https://www.ncbi.nlm.nih.gov/pubmed/35194535
http://dx.doi.org/10.1140/epjp/s13360-022-02470-8
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author Kaziz, Sameh
Saad, Yosra
Gazzah, Mohamed Hichem
Belmabrouk, Hafedh
author_facet Kaziz, Sameh
Saad, Yosra
Gazzah, Mohamed Hichem
Belmabrouk, Hafedh
author_sort Kaziz, Sameh
collection PubMed
description In this study, we performed 3D finite element simulations on the binding reaction kinetics of SARS-CoV-2 S protein (target analyte) and its corresponding immobilized antibody (ligand) in a heterogeneous microfluidic immunoassay. Two types of biosensors with two different shapes and geometries of the reaction surface and electrodes were studied. Alternating current electrothermal (ACET) force was applied to improve the binding efficiency of the biomolecular pairs by accelerating the transport of analytes to the binding surface. The ACET force stirs the flow field, thereby reducing the thickness of the diffusion boundary layer, often developed on the reaction surface due to the slow flow velocity, low analyte diffusion coefficient, and surface reaction high rate. The results showed that the detection time of one of the biosensors can be improved by 69% under an applied voltage of 10 Vrms and an operating frequency of 100 kHz. Certain control factors such as the thermal boundary conditions as well as the electrical conductivity of the buffer solution were analyzed in order to find the appropriate values to improve the efficiency of the biosensor.
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spelling pubmed-88544862022-02-18 3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design Kaziz, Sameh Saad, Yosra Gazzah, Mohamed Hichem Belmabrouk, Hafedh Eur Phys J Plus Regular Article In this study, we performed 3D finite element simulations on the binding reaction kinetics of SARS-CoV-2 S protein (target analyte) and its corresponding immobilized antibody (ligand) in a heterogeneous microfluidic immunoassay. Two types of biosensors with two different shapes and geometries of the reaction surface and electrodes were studied. Alternating current electrothermal (ACET) force was applied to improve the binding efficiency of the biomolecular pairs by accelerating the transport of analytes to the binding surface. The ACET force stirs the flow field, thereby reducing the thickness of the diffusion boundary layer, often developed on the reaction surface due to the slow flow velocity, low analyte diffusion coefficient, and surface reaction high rate. The results showed that the detection time of one of the biosensors can be improved by 69% under an applied voltage of 10 Vrms and an operating frequency of 100 kHz. Certain control factors such as the thermal boundary conditions as well as the electrical conductivity of the buffer solution were analyzed in order to find the appropriate values to improve the efficiency of the biosensor. Springer Berlin Heidelberg 2022-02-18 2022 /pmc/articles/PMC8854486/ /pubmed/35194535 http://dx.doi.org/10.1140/epjp/s13360-022-02470-8 Text en © The Author(s), under exclusive licence to Società Italiana di Fisica and Springer-Verlag GmbH Germany, part of Springer Nature 2022 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Regular Article
Kaziz, Sameh
Saad, Yosra
Gazzah, Mohamed Hichem
Belmabrouk, Hafedh
3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design
title 3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design
title_full 3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design
title_fullStr 3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design
title_full_unstemmed 3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design
title_short 3D simulation of microfluidic biosensor for SARS-CoV-2 S protein binding kinetics using new reaction surface design
title_sort 3d simulation of microfluidic biosensor for sars-cov-2 s protein binding kinetics using new reaction surface design
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8854486/
https://www.ncbi.nlm.nih.gov/pubmed/35194535
http://dx.doi.org/10.1140/epjp/s13360-022-02470-8
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