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Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars
It has been proven that the random regression model has a great advantage over the repeatability model in longitudinal data analysis. At present, the random regression model has been used as a standard analysis method in longitudinal data analysis. The aim of this study was to estimate the variance...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8854859/ https://www.ncbi.nlm.nih.gov/pubmed/35186033 http://dx.doi.org/10.3389/fgene.2022.805651 |
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author | Hong, Yifeng Yan, Limin He, Xiaoyan Wu, Dan Ye, Jian Cai, Gengyuan Liu, Dewu Wu, Zhenfang Tan, Cheng |
author_facet | Hong, Yifeng Yan, Limin He, Xiaoyan Wu, Dan Ye, Jian Cai, Gengyuan Liu, Dewu Wu, Zhenfang Tan, Cheng |
author_sort | Hong, Yifeng |
collection | PubMed |
description | It has been proven that the random regression model has a great advantage over the repeatability model in longitudinal data analysis. At present, the random regression model has been used as a standard analysis method in longitudinal data analysis. The aim of this study was to estimate the variance components and heritability of semen traits over the reproductive lifetime of boars. The study data, including 124,941 records from 3,366 boars, were collected from seven boar AI centers in South China between 2010 and 2019. To evaluate alternative models, we compared different polynomial orders of fixed, additive, and permanent environment effects in total 216 models using Bayesian Information Criterions. The result indicated that the best model always has higher-order polynomials of permanent environment effect and lower-order polynomials of fixed effect and additive effect regression. In Landrace boars, the heritabilities ranged from 0.18 to 0.28, 0.06 to 0.43, 0.03 to 0.14, and 0.05 to 0.24 for semen volume, sperm motility, sperm concentration, and abnormal sperm percentage, respectively. In Large White boars, the heritabilities ranged from 0.20 to 0.26, 0.07 to 0.15, 0.10 to 0.23, and 0.06 to 0.34 for semen volume, sperm motility, sperm concentration, and abnormal sperm percentage, respectively. |
format | Online Article Text |
id | pubmed-8854859 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88548592022-02-19 Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars Hong, Yifeng Yan, Limin He, Xiaoyan Wu, Dan Ye, Jian Cai, Gengyuan Liu, Dewu Wu, Zhenfang Tan, Cheng Front Genet Genetics It has been proven that the random regression model has a great advantage over the repeatability model in longitudinal data analysis. At present, the random regression model has been used as a standard analysis method in longitudinal data analysis. The aim of this study was to estimate the variance components and heritability of semen traits over the reproductive lifetime of boars. The study data, including 124,941 records from 3,366 boars, were collected from seven boar AI centers in South China between 2010 and 2019. To evaluate alternative models, we compared different polynomial orders of fixed, additive, and permanent environment effects in total 216 models using Bayesian Information Criterions. The result indicated that the best model always has higher-order polynomials of permanent environment effect and lower-order polynomials of fixed effect and additive effect regression. In Landrace boars, the heritabilities ranged from 0.18 to 0.28, 0.06 to 0.43, 0.03 to 0.14, and 0.05 to 0.24 for semen volume, sperm motility, sperm concentration, and abnormal sperm percentage, respectively. In Large White boars, the heritabilities ranged from 0.20 to 0.26, 0.07 to 0.15, 0.10 to 0.23, and 0.06 to 0.34 for semen volume, sperm motility, sperm concentration, and abnormal sperm percentage, respectively. Frontiers Media S.A. 2022-02-04 /pmc/articles/PMC8854859/ /pubmed/35186033 http://dx.doi.org/10.3389/fgene.2022.805651 Text en Copyright © 2022 Hong, Yan, He, Wu, Ye, Cai, Liu, Wu and Tan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Hong, Yifeng Yan, Limin He, Xiaoyan Wu, Dan Ye, Jian Cai, Gengyuan Liu, Dewu Wu, Zhenfang Tan, Cheng Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars |
title | Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars |
title_full | Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars |
title_fullStr | Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars |
title_full_unstemmed | Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars |
title_short | Estimates of Variance Components and Heritability Using Random Regression Models for Semen Traits in Boars |
title_sort | estimates of variance components and heritability using random regression models for semen traits in boars |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8854859/ https://www.ncbi.nlm.nih.gov/pubmed/35186033 http://dx.doi.org/10.3389/fgene.2022.805651 |
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