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A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors
Although cell-based or animal-based research evidence support the association of Holliday junction recognition protein (HJURP) with cancers, no pan-cancer investigation has been reported. The datasets of Gene Expression Omnibus database along with The Cancer Genome Atlas project were used to evaluat...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
De Gruyter
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8854909/ https://www.ncbi.nlm.nih.gov/pubmed/35274047 http://dx.doi.org/10.1515/med-2022-0423 |
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author | Su, Rong Huang, Hechen Gao, Xingxing Zhou, Yuan Yin, Shengyong Xie, Haiyang Zhou, Lin Zheng, Shusen |
author_facet | Su, Rong Huang, Hechen Gao, Xingxing Zhou, Yuan Yin, Shengyong Xie, Haiyang Zhou, Lin Zheng, Shusen |
author_sort | Su, Rong |
collection | PubMed |
description | Although cell-based or animal-based research evidence support the association of Holliday junction recognition protein (HJURP) with cancers, no pan-cancer investigation has been reported. The datasets of Gene Expression Omnibus database along with The Cancer Genome Atlas project were used to evaluate the expression of HJURP in various types of tumors. HJURP is overexpressed in a considerable number of cancers, and some changes in DNA methylation and genetic alterations are discovered in some types of tumors, such as kidney-related and adrenal gland-related tumors. Based on PrognoScan and gene expression profiling interactive analysis (GEPIA), the elevated expression of HJURP worsened the survival time of individuals with cancer. The biological general repository for interaction datasets (BioGRID) and The database for annotation, visualization and integrated discovery (DAVID) were used to establish the functional molecular network. It revealed that the cell cycle and p53 signaling pathway are the key molecular mechanisms that HJURP promotes carcinogenesis. The nomograms between HJURP and clinical pathological factors based on the Cox proportional hazards model showed a good prognostic performance in kidney carcinoma, hepatocellular carcinoma, and lung adenocarcinoma. Our first pan-cancer study provides a relatively profound insights into the oncogenic roles of HJURP across different tumors. |
format | Online Article Text |
id | pubmed-8854909 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | De Gruyter |
record_format | MEDLINE/PubMed |
spelling | pubmed-88549092022-03-09 A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors Su, Rong Huang, Hechen Gao, Xingxing Zhou, Yuan Yin, Shengyong Xie, Haiyang Zhou, Lin Zheng, Shusen Open Med (Wars) Research Article Although cell-based or animal-based research evidence support the association of Holliday junction recognition protein (HJURP) with cancers, no pan-cancer investigation has been reported. The datasets of Gene Expression Omnibus database along with The Cancer Genome Atlas project were used to evaluate the expression of HJURP in various types of tumors. HJURP is overexpressed in a considerable number of cancers, and some changes in DNA methylation and genetic alterations are discovered in some types of tumors, such as kidney-related and adrenal gland-related tumors. Based on PrognoScan and gene expression profiling interactive analysis (GEPIA), the elevated expression of HJURP worsened the survival time of individuals with cancer. The biological general repository for interaction datasets (BioGRID) and The database for annotation, visualization and integrated discovery (DAVID) were used to establish the functional molecular network. It revealed that the cell cycle and p53 signaling pathway are the key molecular mechanisms that HJURP promotes carcinogenesis. The nomograms between HJURP and clinical pathological factors based on the Cox proportional hazards model showed a good prognostic performance in kidney carcinoma, hepatocellular carcinoma, and lung adenocarcinoma. Our first pan-cancer study provides a relatively profound insights into the oncogenic roles of HJURP across different tumors. De Gruyter 2022-02-16 /pmc/articles/PMC8854909/ /pubmed/35274047 http://dx.doi.org/10.1515/med-2022-0423 Text en © 2022 Rong Su et al., published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. |
spellingShingle | Research Article Su, Rong Huang, Hechen Gao, Xingxing Zhou, Yuan Yin, Shengyong Xie, Haiyang Zhou, Lin Zheng, Shusen A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors |
title | A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors |
title_full | A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors |
title_fullStr | A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors |
title_full_unstemmed | A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors |
title_short | A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors |
title_sort | pan-cancer analysis of the oncogenic role of holliday junction recognition protein in human tumors |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8854909/ https://www.ncbi.nlm.nih.gov/pubmed/35274047 http://dx.doi.org/10.1515/med-2022-0423 |
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