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A matter of trust: Learning lessons about causality will make qAOPs credible
Toxicology in the 21st Century has seen a shift from chemical risk assessment based on traditional animal tests, identifying apical endpoints and doses that are “safe”, to the prospect of Next Generation Risk Assessment based on non-animal methods. Increasingly, large and high throughput in vitro da...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier B.V
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8855346/ https://www.ncbi.nlm.nih.gov/pubmed/35224319 http://dx.doi.org/10.1016/j.comtox.2021.100205 |
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author | Spînu, Nicoleta Cronin, Mark T.D. Madden, Judith C. Worth, Andrew P. |
author_facet | Spînu, Nicoleta Cronin, Mark T.D. Madden, Judith C. Worth, Andrew P. |
author_sort | Spînu, Nicoleta |
collection | PubMed |
description | Toxicology in the 21st Century has seen a shift from chemical risk assessment based on traditional animal tests, identifying apical endpoints and doses that are “safe”, to the prospect of Next Generation Risk Assessment based on non-animal methods. Increasingly, large and high throughput in vitro datasets are being generated and exploited to develop computational models. This is accompanied by an increased use of machine learning approaches in the model building process. A potential problem, however, is that such models, while robust and predictive, may still lack credibility from the perspective of the end-user. In this commentary, we argue that the science of causal inference and reasoning, as proposed by Judea Pearl, will facilitate the development, use and acceptance of quantitative AOP models. Our hope is that by importing established concepts of causality from outside the field of toxicology, we can be “constructively disruptive” to the current toxicological paradigm, using the “Causal Revolution” to bring about a “Toxicological Revolution” more rapidly. |
format | Online Article Text |
id | pubmed-8855346 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier B.V |
record_format | MEDLINE/PubMed |
spelling | pubmed-88553462022-02-23 A matter of trust: Learning lessons about causality will make qAOPs credible Spînu, Nicoleta Cronin, Mark T.D. Madden, Judith C. Worth, Andrew P. Comput Toxicol Article Toxicology in the 21st Century has seen a shift from chemical risk assessment based on traditional animal tests, identifying apical endpoints and doses that are “safe”, to the prospect of Next Generation Risk Assessment based on non-animal methods. Increasingly, large and high throughput in vitro datasets are being generated and exploited to develop computational models. This is accompanied by an increased use of machine learning approaches in the model building process. A potential problem, however, is that such models, while robust and predictive, may still lack credibility from the perspective of the end-user. In this commentary, we argue that the science of causal inference and reasoning, as proposed by Judea Pearl, will facilitate the development, use and acceptance of quantitative AOP models. Our hope is that by importing established concepts of causality from outside the field of toxicology, we can be “constructively disruptive” to the current toxicological paradigm, using the “Causal Revolution” to bring about a “Toxicological Revolution” more rapidly. Elsevier B.V 2022-02 /pmc/articles/PMC8855346/ /pubmed/35224319 http://dx.doi.org/10.1016/j.comtox.2021.100205 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Spînu, Nicoleta Cronin, Mark T.D. Madden, Judith C. Worth, Andrew P. A matter of trust: Learning lessons about causality will make qAOPs credible |
title | A matter of trust: Learning lessons about causality will make qAOPs credible |
title_full | A matter of trust: Learning lessons about causality will make qAOPs credible |
title_fullStr | A matter of trust: Learning lessons about causality will make qAOPs credible |
title_full_unstemmed | A matter of trust: Learning lessons about causality will make qAOPs credible |
title_short | A matter of trust: Learning lessons about causality will make qAOPs credible |
title_sort | matter of trust: learning lessons about causality will make qaops credible |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8855346/ https://www.ncbi.nlm.nih.gov/pubmed/35224319 http://dx.doi.org/10.1016/j.comtox.2021.100205 |
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