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A matter of trust: Learning lessons about causality will make qAOPs credible

Toxicology in the 21st Century has seen a shift from chemical risk assessment based on traditional animal tests, identifying apical endpoints and doses that are “safe”, to the prospect of Next Generation Risk Assessment based on non-animal methods. Increasingly, large and high throughput in vitro da...

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Detalles Bibliográficos
Autores principales: Spînu, Nicoleta, Cronin, Mark T.D., Madden, Judith C., Worth, Andrew P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8855346/
https://www.ncbi.nlm.nih.gov/pubmed/35224319
http://dx.doi.org/10.1016/j.comtox.2021.100205
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author Spînu, Nicoleta
Cronin, Mark T.D.
Madden, Judith C.
Worth, Andrew P.
author_facet Spînu, Nicoleta
Cronin, Mark T.D.
Madden, Judith C.
Worth, Andrew P.
author_sort Spînu, Nicoleta
collection PubMed
description Toxicology in the 21st Century has seen a shift from chemical risk assessment based on traditional animal tests, identifying apical endpoints and doses that are “safe”, to the prospect of Next Generation Risk Assessment based on non-animal methods. Increasingly, large and high throughput in vitro datasets are being generated and exploited to develop computational models. This is accompanied by an increased use of machine learning approaches in the model building process. A potential problem, however, is that such models, while robust and predictive, may still lack credibility from the perspective of the end-user. In this commentary, we argue that the science of causal inference and reasoning, as proposed by Judea Pearl, will facilitate the development, use and acceptance of quantitative AOP models. Our hope is that by importing established concepts of causality from outside the field of toxicology, we can be “constructively disruptive” to the current toxicological paradigm, using the “Causal Revolution” to bring about a “Toxicological Revolution” more rapidly.
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spelling pubmed-88553462022-02-23 A matter of trust: Learning lessons about causality will make qAOPs credible Spînu, Nicoleta Cronin, Mark T.D. Madden, Judith C. Worth, Andrew P. Comput Toxicol Article Toxicology in the 21st Century has seen a shift from chemical risk assessment based on traditional animal tests, identifying apical endpoints and doses that are “safe”, to the prospect of Next Generation Risk Assessment based on non-animal methods. Increasingly, large and high throughput in vitro datasets are being generated and exploited to develop computational models. This is accompanied by an increased use of machine learning approaches in the model building process. A potential problem, however, is that such models, while robust and predictive, may still lack credibility from the perspective of the end-user. In this commentary, we argue that the science of causal inference and reasoning, as proposed by Judea Pearl, will facilitate the development, use and acceptance of quantitative AOP models. Our hope is that by importing established concepts of causality from outside the field of toxicology, we can be “constructively disruptive” to the current toxicological paradigm, using the “Causal Revolution” to bring about a “Toxicological Revolution” more rapidly. Elsevier B.V 2022-02 /pmc/articles/PMC8855346/ /pubmed/35224319 http://dx.doi.org/10.1016/j.comtox.2021.100205 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Spînu, Nicoleta
Cronin, Mark T.D.
Madden, Judith C.
Worth, Andrew P.
A matter of trust: Learning lessons about causality will make qAOPs credible
title A matter of trust: Learning lessons about causality will make qAOPs credible
title_full A matter of trust: Learning lessons about causality will make qAOPs credible
title_fullStr A matter of trust: Learning lessons about causality will make qAOPs credible
title_full_unstemmed A matter of trust: Learning lessons about causality will make qAOPs credible
title_short A matter of trust: Learning lessons about causality will make qAOPs credible
title_sort matter of trust: learning lessons about causality will make qaops credible
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8855346/
https://www.ncbi.nlm.nih.gov/pubmed/35224319
http://dx.doi.org/10.1016/j.comtox.2021.100205
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