Cargando…

Erythrocyte (red blood cell) dataset in thalassemia case

Red blood cell (RBC) dataset was obtained from four thalassemia peripheral blood smears and a healthy peripheral blood smear. The dataset contains 7108 images of individual red blood cells for nine cell types. The first process is image acquisition, which is the process of retrieving microscopic ima...

Descripción completa

Detalles Bibliográficos
Autores principales: Tyas, Dyah Aruming, Ratnaningsih, Tri, Harjoko, Agus, Hartati, Sri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8857444/
https://www.ncbi.nlm.nih.gov/pubmed/35242901
http://dx.doi.org/10.1016/j.dib.2022.107886
_version_ 1784654043197472768
author Tyas, Dyah Aruming
Ratnaningsih, Tri
Harjoko, Agus
Hartati, Sri
author_facet Tyas, Dyah Aruming
Ratnaningsih, Tri
Harjoko, Agus
Hartati, Sri
author_sort Tyas, Dyah Aruming
collection PubMed
description Red blood cell (RBC) dataset was obtained from four thalassemia peripheral blood smears and a healthy peripheral blood smear. The dataset contains 7108 images of individual red blood cells for nine cell types. The first process is image acquisition, which is the process of retrieving microscopic image data from peripheral blood smears through a Olympus CX21 microscope using an Optilab advance plus camera. Laboratory assistants helped obtain ideal erythrocyte images. We provide peripheral blood smear from four thalassemia patients in the ThalassemiaPBS dataset. After image acquisition, the image is resized from 4100 × 3075 pixels to 800 × 600 pixels to reduce the computing load in the next stage. We extracted the green color component (green channel) of the RGB image and used it in the next process. We chose the green channel because it is not affected by variations in color and brightness. Furthermore, the segmentation stage is carried out to obtain an object in the form of a single red blood cell. After that, the object can be classified according to the type of red blood cell. This dataset can become an opportunity for international researchers to develop the classification method for red blood cells.
format Online
Article
Text
id pubmed-8857444
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-88574442022-03-02 Erythrocyte (red blood cell) dataset in thalassemia case Tyas, Dyah Aruming Ratnaningsih, Tri Harjoko, Agus Hartati, Sri Data Brief Data Article Red blood cell (RBC) dataset was obtained from four thalassemia peripheral blood smears and a healthy peripheral blood smear. The dataset contains 7108 images of individual red blood cells for nine cell types. The first process is image acquisition, which is the process of retrieving microscopic image data from peripheral blood smears through a Olympus CX21 microscope using an Optilab advance plus camera. Laboratory assistants helped obtain ideal erythrocyte images. We provide peripheral blood smear from four thalassemia patients in the ThalassemiaPBS dataset. After image acquisition, the image is resized from 4100 × 3075 pixels to 800 × 600 pixels to reduce the computing load in the next stage. We extracted the green color component (green channel) of the RGB image and used it in the next process. We chose the green channel because it is not affected by variations in color and brightness. Furthermore, the segmentation stage is carried out to obtain an object in the form of a single red blood cell. After that, the object can be classified according to the type of red blood cell. This dataset can become an opportunity for international researchers to develop the classification method for red blood cells. Elsevier 2022-02-02 /pmc/articles/PMC8857444/ /pubmed/35242901 http://dx.doi.org/10.1016/j.dib.2022.107886 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Tyas, Dyah Aruming
Ratnaningsih, Tri
Harjoko, Agus
Hartati, Sri
Erythrocyte (red blood cell) dataset in thalassemia case
title Erythrocyte (red blood cell) dataset in thalassemia case
title_full Erythrocyte (red blood cell) dataset in thalassemia case
title_fullStr Erythrocyte (red blood cell) dataset in thalassemia case
title_full_unstemmed Erythrocyte (red blood cell) dataset in thalassemia case
title_short Erythrocyte (red blood cell) dataset in thalassemia case
title_sort erythrocyte (red blood cell) dataset in thalassemia case
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8857444/
https://www.ncbi.nlm.nih.gov/pubmed/35242901
http://dx.doi.org/10.1016/j.dib.2022.107886
work_keys_str_mv AT tyasdyaharuming erythrocyteredbloodcelldatasetinthalassemiacase
AT ratnaningsihtri erythrocyteredbloodcelldatasetinthalassemiacase
AT harjokoagus erythrocyteredbloodcelldatasetinthalassemiacase
AT hartatisri erythrocyteredbloodcelldatasetinthalassemiacase