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Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection
BACKGROUND: The world has been suffering from the COVID-19 pandemic since 2019. More than 5 million people have died. Pneumonia is caused by the COVID-19 virus, which can be diagnosed using chest X-ray and computed tomography (CT) scans. COVID-19 also causes clinical and subclinical cardiovascular i...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Ltd.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8858432/ https://www.ncbi.nlm.nih.gov/pubmed/35219186 http://dx.doi.org/10.1016/j.compbiomed.2022.105335 |
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author | Sobahi, Nebras Sengur, Abdulkadir Tan, Ru-San Acharya, U. Rajendra |
author_facet | Sobahi, Nebras Sengur, Abdulkadir Tan, Ru-San Acharya, U. Rajendra |
author_sort | Sobahi, Nebras |
collection | PubMed |
description | BACKGROUND: The world has been suffering from the COVID-19 pandemic since 2019. More than 5 million people have died. Pneumonia is caused by the COVID-19 virus, which can be diagnosed using chest X-ray and computed tomography (CT) scans. COVID-19 also causes clinical and subclinical cardiovascular injury that may be detected on electrocardiography (ECG), which is easily accessible. METHOD: For ECG-based COVID-19 detection, we developed a novel attention-based 3D convolutional neural network (CNN) model with residual connections (RC). In this paper, the deep learning (DL) approach was developed using 12-lead ECG printouts obtained from 250 normal subjects, 250 patients with COVID-19 and 250 with abnormal heartbeat. For binary classification, the COVID-19 and normal classes were considered; and for multiclass classification, all classes. The ECGs were preprocessed into standard ECG lead segments that were channeled into 12-dimensional volumes as input to the network model. Our developed model comprised of 19 layers with three 3D convolutional, three batch normalization, three rectified linear unit, two dropouts, two additional (for residual connections), one attention, and one fully connected layer. The RC were used to improve gradient flow through the developed network, and attention layer, to connect the second residual connection to the fully connected layer through the batch normalization layer. RESULTS: A publicly available dataset was used in this work. We obtained average accuracies of 99.0% and 92.0% for binary and multiclass classifications, respectively, using ten-fold cross-validation. Our proposed model is ready to be tested with a huge ECG database. |
format | Online Article Text |
id | pubmed-8858432 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88584322022-02-22 Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection Sobahi, Nebras Sengur, Abdulkadir Tan, Ru-San Acharya, U. Rajendra Comput Biol Med Article BACKGROUND: The world has been suffering from the COVID-19 pandemic since 2019. More than 5 million people have died. Pneumonia is caused by the COVID-19 virus, which can be diagnosed using chest X-ray and computed tomography (CT) scans. COVID-19 also causes clinical and subclinical cardiovascular injury that may be detected on electrocardiography (ECG), which is easily accessible. METHOD: For ECG-based COVID-19 detection, we developed a novel attention-based 3D convolutional neural network (CNN) model with residual connections (RC). In this paper, the deep learning (DL) approach was developed using 12-lead ECG printouts obtained from 250 normal subjects, 250 patients with COVID-19 and 250 with abnormal heartbeat. For binary classification, the COVID-19 and normal classes were considered; and for multiclass classification, all classes. The ECGs were preprocessed into standard ECG lead segments that were channeled into 12-dimensional volumes as input to the network model. Our developed model comprised of 19 layers with three 3D convolutional, three batch normalization, three rectified linear unit, two dropouts, two additional (for residual connections), one attention, and one fully connected layer. The RC were used to improve gradient flow through the developed network, and attention layer, to connect the second residual connection to the fully connected layer through the batch normalization layer. RESULTS: A publicly available dataset was used in this work. We obtained average accuracies of 99.0% and 92.0% for binary and multiclass classifications, respectively, using ten-fold cross-validation. Our proposed model is ready to be tested with a huge ECG database. Elsevier Ltd. 2022-04 2022-02-20 /pmc/articles/PMC8858432/ /pubmed/35219186 http://dx.doi.org/10.1016/j.compbiomed.2022.105335 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Sobahi, Nebras Sengur, Abdulkadir Tan, Ru-San Acharya, U. Rajendra Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection |
title | Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection |
title_full | Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection |
title_fullStr | Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection |
title_full_unstemmed | Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection |
title_short | Attention-based 3D CNN with residual connections for efficient ECG-based COVID-19 detection |
title_sort | attention-based 3d cnn with residual connections for efficient ecg-based covid-19 detection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8858432/ https://www.ncbi.nlm.nih.gov/pubmed/35219186 http://dx.doi.org/10.1016/j.compbiomed.2022.105335 |
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