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A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients

Gastric cancer (GC) is one of the most common malignant gastrointestinal tumors worldwide. Pyroptosis was widely reported to exert a crucial function in tumor development. In addition, pyroptosis was also proved to be associated with the immune landscape. However, whether pyroptosis-related lncRNAs...

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Autores principales: Xu, Tingting, Gu, Hanxin, Zhang, Changsong, Zhang, Wushuang, Liang, Xiaolong, Cheng, Xiaoxia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8859253/
https://www.ncbi.nlm.nih.gov/pubmed/35198013
http://dx.doi.org/10.3389/fgene.2022.843538
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author Xu, Tingting
Gu, Hanxin
Zhang, Changsong
Zhang, Wushuang
Liang, Xiaolong
Cheng, Xiaoxia
author_facet Xu, Tingting
Gu, Hanxin
Zhang, Changsong
Zhang, Wushuang
Liang, Xiaolong
Cheng, Xiaoxia
author_sort Xu, Tingting
collection PubMed
description Gastric cancer (GC) is one of the most common malignant gastrointestinal tumors worldwide. Pyroptosis was widely reported to exert a crucial function in tumor development. In addition, pyroptosis was also proved to be associated with the immune landscape. However, whether pyroptosis-related lncRNAs are associated with the prognosis and the immune landscape of GC remains unclear. In the present study, we first constructed a novel risk model by using pyroptosis-related lncRNAs. We identified 11 pyroptosis-related lncRNAs for the establishment of the risk model. The risk model could be used to predict the survival outcome and immune landscape of GC patients. The results of survival analysis and AUC value of a time-related ROC curve proved that our risk model has an elevated efficiency and accuracy in predicting the survival outcome of patients. We also found that the risk model was also associated with the immune landscape, drug sensitivity, and tumor mutation burden of GC patients. In conclusion, our risk model plays a crucial role in the tumor immune microenvironment and could be used to predict survival outcomes of GC patients.
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spelling pubmed-88592532022-02-22 A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients Xu, Tingting Gu, Hanxin Zhang, Changsong Zhang, Wushuang Liang, Xiaolong Cheng, Xiaoxia Front Genet Genetics Gastric cancer (GC) is one of the most common malignant gastrointestinal tumors worldwide. Pyroptosis was widely reported to exert a crucial function in tumor development. In addition, pyroptosis was also proved to be associated with the immune landscape. However, whether pyroptosis-related lncRNAs are associated with the prognosis and the immune landscape of GC remains unclear. In the present study, we first constructed a novel risk model by using pyroptosis-related lncRNAs. We identified 11 pyroptosis-related lncRNAs for the establishment of the risk model. The risk model could be used to predict the survival outcome and immune landscape of GC patients. The results of survival analysis and AUC value of a time-related ROC curve proved that our risk model has an elevated efficiency and accuracy in predicting the survival outcome of patients. We also found that the risk model was also associated with the immune landscape, drug sensitivity, and tumor mutation burden of GC patients. In conclusion, our risk model plays a crucial role in the tumor immune microenvironment and could be used to predict survival outcomes of GC patients. Frontiers Media S.A. 2022-02-07 /pmc/articles/PMC8859253/ /pubmed/35198013 http://dx.doi.org/10.3389/fgene.2022.843538 Text en Copyright © 2022 Xu, Gu, Zhang, Zhang, Liang and Cheng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Xu, Tingting
Gu, Hanxin
Zhang, Changsong
Zhang, Wushuang
Liang, Xiaolong
Cheng, Xiaoxia
A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients
title A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients
title_full A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients
title_fullStr A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients
title_full_unstemmed A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients
title_short A Novel Risk Model Identified Based on Pyroptosis-Related lncRNA Predicts Overall Survival and Associates With the Immune Landscape of GC Patients
title_sort novel risk model identified based on pyroptosis-related lncrna predicts overall survival and associates with the immune landscape of gc patients
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8859253/
https://www.ncbi.nlm.nih.gov/pubmed/35198013
http://dx.doi.org/10.3389/fgene.2022.843538
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