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S(N)2 Reactions with an Ambident Nucleophile: A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems
[Image: see text] We characterize the Walden-inversion, front-side attack, and double-inversion S(N)2 pathways leading to Y(–) + CH(3)CN/CH(3)NC and the product channels of proton abstraction (HCN/HNC + CH(2)Y(–)), hydride-ion substitution (H(–) + YH(2)CCN/YH(2)CNC), halogen abstraction (YCN(–)/YNC(...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8859826/ https://www.ncbi.nlm.nih.gov/pubmed/35107284 http://dx.doi.org/10.1021/acs.jpca.1c10448 |
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author | Kerekes, Zsolt Tasi, Domonkos A. Czakó, Gábor |
author_facet | Kerekes, Zsolt Tasi, Domonkos A. Czakó, Gábor |
author_sort | Kerekes, Zsolt |
collection | PubMed |
description | [Image: see text] We characterize the Walden-inversion, front-side attack, and double-inversion S(N)2 pathways leading to Y(–) + CH(3)CN/CH(3)NC and the product channels of proton abstraction (HCN/HNC + CH(2)Y(–)), hydride-ion substitution (H(–) + YH(2)CCN/YH(2)CNC), halogen abstraction (YCN(–)/YNC(–) + CH(3) and YCN/YNC + CH(3)(–)), and YHCN(–)/YHNC(–) complex formation (YHCN(–)/YHNC(–) + (1)CH(2)) of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] reactions. Benchmark structures and frequencies are computed at the CCSD(T)-F12b/aug-cc-pVTZ level of theory, and a composite approach is employed to obtain relative energies with sub-chemical accuracy considering (a) basis-set effects up to aug-cc-pVQZ, (b) post-CCSD(T) correlation up to CCSDT(Q), (c) core correlation, (d) relativistic effects, and (e) zero-point energy corrections. C–C bond formation is both thermodynamically and kinetically more preferred than N–C bond formation, though the kinetic preference is less significant. Walden inversion proceeds via low or submerged barriers (12.1/17.9(F), 0.0/4.3(Cl), −3.9/0.1(Br), and −5.8/–1.8(I) kcal/mol for C–C/N–C bond formation), front-side attack and double inversion have high barriers (30–64 kcal/mol), the latter is the lower-energy retention pathway, and the non-S(N)2 electronic ground-state product channels are endothermic (ΔH(0) = 31–92 kcal/mol). |
format | Online Article Text |
id | pubmed-8859826 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-88598262022-02-22 S(N)2 Reactions with an Ambident Nucleophile: A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems Kerekes, Zsolt Tasi, Domonkos A. Czakó, Gábor J Phys Chem A [Image: see text] We characterize the Walden-inversion, front-side attack, and double-inversion S(N)2 pathways leading to Y(–) + CH(3)CN/CH(3)NC and the product channels of proton abstraction (HCN/HNC + CH(2)Y(–)), hydride-ion substitution (H(–) + YH(2)CCN/YH(2)CNC), halogen abstraction (YCN(–)/YNC(–) + CH(3) and YCN/YNC + CH(3)(–)), and YHCN(–)/YHNC(–) complex formation (YHCN(–)/YHNC(–) + (1)CH(2)) of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] reactions. Benchmark structures and frequencies are computed at the CCSD(T)-F12b/aug-cc-pVTZ level of theory, and a composite approach is employed to obtain relative energies with sub-chemical accuracy considering (a) basis-set effects up to aug-cc-pVQZ, (b) post-CCSD(T) correlation up to CCSDT(Q), (c) core correlation, (d) relativistic effects, and (e) zero-point energy corrections. C–C bond formation is both thermodynamically and kinetically more preferred than N–C bond formation, though the kinetic preference is less significant. Walden inversion proceeds via low or submerged barriers (12.1/17.9(F), 0.0/4.3(Cl), −3.9/0.1(Br), and −5.8/–1.8(I) kcal/mol for C–C/N–C bond formation), front-side attack and double inversion have high barriers (30–64 kcal/mol), the latter is the lower-energy retention pathway, and the non-S(N)2 electronic ground-state product channels are endothermic (ΔH(0) = 31–92 kcal/mol). American Chemical Society 2022-02-02 2022-02-17 /pmc/articles/PMC8859826/ /pubmed/35107284 http://dx.doi.org/10.1021/acs.jpca.1c10448 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Kerekes, Zsolt Tasi, Domonkos A. Czakó, Gábor S(N)2 Reactions with an Ambident Nucleophile: A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems |
title | S(N)2 Reactions with an Ambident Nucleophile:
A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems |
title_full | S(N)2 Reactions with an Ambident Nucleophile:
A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems |
title_fullStr | S(N)2 Reactions with an Ambident Nucleophile:
A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems |
title_full_unstemmed | S(N)2 Reactions with an Ambident Nucleophile:
A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems |
title_short | S(N)2 Reactions with an Ambident Nucleophile:
A Benchmark Ab Initio Study of the CN(–) + CH(3)Y [Y = F, Cl, Br, and I] Systems |
title_sort | s(n)2 reactions with an ambident nucleophile:
a benchmark ab initio study of the cn(–) + ch(3)y [y = f, cl, br, and i] systems |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8859826/ https://www.ncbi.nlm.nih.gov/pubmed/35107284 http://dx.doi.org/10.1021/acs.jpca.1c10448 |
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