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OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations

BACKGROUND: The ability to measure joint kinematics in natural environments over long durations using inertial measurement units (IMUs) could enable at-home monitoring and personalized treatment of neurological and musculoskeletal disorders. However, drift, or the accumulation of error over time, in...

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Autores principales: Al Borno, Mazen, O’Day, Johanna, Ibarra, Vanessa, Dunne, James, Seth, Ajay, Habib, Ayman, Ong, Carmichael, Hicks, Jennifer, Uhlrich, Scott, Delp, Scott
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8859896/
https://www.ncbi.nlm.nih.gov/pubmed/35184727
http://dx.doi.org/10.1186/s12984-022-01001-x
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author Al Borno, Mazen
O’Day, Johanna
Ibarra, Vanessa
Dunne, James
Seth, Ajay
Habib, Ayman
Ong, Carmichael
Hicks, Jennifer
Uhlrich, Scott
Delp, Scott
author_facet Al Borno, Mazen
O’Day, Johanna
Ibarra, Vanessa
Dunne, James
Seth, Ajay
Habib, Ayman
Ong, Carmichael
Hicks, Jennifer
Uhlrich, Scott
Delp, Scott
author_sort Al Borno, Mazen
collection PubMed
description BACKGROUND: The ability to measure joint kinematics in natural environments over long durations using inertial measurement units (IMUs) could enable at-home monitoring and personalized treatment of neurological and musculoskeletal disorders. However, drift, or the accumulation of error over time, inhibits the accurate measurement of movement over long durations. We sought to develop an open-source workflow to estimate lower extremity joint kinematics from IMU data that was accurate and capable of assessing and mitigating drift. METHODS: We computed IMU-based estimates of kinematics using sensor fusion and an inverse kinematics approach with a constrained biomechanical model. We measured kinematics for 11 subjects as they performed two 10-min trials: walking and a repeated sequence of varied lower-extremity movements. To validate the approach, we compared the joint angles computed with IMU orientations to the joint angles computed from optical motion capture using root mean square (RMS) difference and Pearson correlations, and estimated drift using a linear regression on each subject’s RMS differences over time. RESULTS: IMU-based kinematic estimates agreed with optical motion capture; median RMS differences over all subjects and all minutes were between 3 and 6 degrees for all joint angles except hip rotation and correlation coefficients were moderate to strong (r = 0.60–0.87). We observed minimal drift in the RMS differences over 10 min; the average slopes of the linear fits to these data were near zero (− 0.14–0.17 deg/min). CONCLUSIONS: Our workflow produced joint kinematics consistent with those estimated by optical motion capture, and could mitigate kinematic drift even in the trials of continuous walking without rest, which may obviate the need for explicit sensor recalibration (e.g. sitting or standing still for a few seconds or zero-velocity updates) used in current drift-mitigation approaches when studying similar activities. This could enable long-duration measurements, bringing the field one step closer to estimating kinematics in natural environments. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12984-022-01001-x.
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spelling pubmed-88598962022-02-23 OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations Al Borno, Mazen O’Day, Johanna Ibarra, Vanessa Dunne, James Seth, Ajay Habib, Ayman Ong, Carmichael Hicks, Jennifer Uhlrich, Scott Delp, Scott J Neuroeng Rehabil Research BACKGROUND: The ability to measure joint kinematics in natural environments over long durations using inertial measurement units (IMUs) could enable at-home monitoring and personalized treatment of neurological and musculoskeletal disorders. However, drift, or the accumulation of error over time, inhibits the accurate measurement of movement over long durations. We sought to develop an open-source workflow to estimate lower extremity joint kinematics from IMU data that was accurate and capable of assessing and mitigating drift. METHODS: We computed IMU-based estimates of kinematics using sensor fusion and an inverse kinematics approach with a constrained biomechanical model. We measured kinematics for 11 subjects as they performed two 10-min trials: walking and a repeated sequence of varied lower-extremity movements. To validate the approach, we compared the joint angles computed with IMU orientations to the joint angles computed from optical motion capture using root mean square (RMS) difference and Pearson correlations, and estimated drift using a linear regression on each subject’s RMS differences over time. RESULTS: IMU-based kinematic estimates agreed with optical motion capture; median RMS differences over all subjects and all minutes were between 3 and 6 degrees for all joint angles except hip rotation and correlation coefficients were moderate to strong (r = 0.60–0.87). We observed minimal drift in the RMS differences over 10 min; the average slopes of the linear fits to these data were near zero (− 0.14–0.17 deg/min). CONCLUSIONS: Our workflow produced joint kinematics consistent with those estimated by optical motion capture, and could mitigate kinematic drift even in the trials of continuous walking without rest, which may obviate the need for explicit sensor recalibration (e.g. sitting or standing still for a few seconds or zero-velocity updates) used in current drift-mitigation approaches when studying similar activities. This could enable long-duration measurements, bringing the field one step closer to estimating kinematics in natural environments. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12984-022-01001-x. BioMed Central 2022-02-20 /pmc/articles/PMC8859896/ /pubmed/35184727 http://dx.doi.org/10.1186/s12984-022-01001-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Al Borno, Mazen
O’Day, Johanna
Ibarra, Vanessa
Dunne, James
Seth, Ajay
Habib, Ayman
Ong, Carmichael
Hicks, Jennifer
Uhlrich, Scott
Delp, Scott
OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations
title OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations
title_full OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations
title_fullStr OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations
title_full_unstemmed OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations
title_short OpenSense: An open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations
title_sort opensense: an open-source toolbox for inertial-measurement-unit-based measurement of lower extremity kinematics over long durations
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8859896/
https://www.ncbi.nlm.nih.gov/pubmed/35184727
http://dx.doi.org/10.1186/s12984-022-01001-x
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