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Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy

Cardiac hypertrophy is an adaptive cardiac response that accommodates the variable hemodynamic demands of the human body during extended periods of preload or afterload increase. In recent years, an increasing number of studies have pointed to a potential connection between myocardial hypertrophy an...

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Autores principales: Chen, Yang-Hao, Zhong, Ling-Feng, Hong, Xia, Zhu, Qian-Li, Wang, Song-Jie, Han, Ji-Bo, Huang, Wei-Jian, Ye, Bo-Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8860901/
https://www.ncbi.nlm.nih.gov/pubmed/35211156
http://dx.doi.org/10.3389/fgene.2022.781676
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author Chen, Yang-Hao
Zhong, Ling-Feng
Hong, Xia
Zhu, Qian-Li
Wang, Song-Jie
Han, Ji-Bo
Huang, Wei-Jian
Ye, Bo-Zhi
author_facet Chen, Yang-Hao
Zhong, Ling-Feng
Hong, Xia
Zhu, Qian-Li
Wang, Song-Jie
Han, Ji-Bo
Huang, Wei-Jian
Ye, Bo-Zhi
author_sort Chen, Yang-Hao
collection PubMed
description Cardiac hypertrophy is an adaptive cardiac response that accommodates the variable hemodynamic demands of the human body during extended periods of preload or afterload increase. In recent years, an increasing number of studies have pointed to a potential connection between myocardial hypertrophy and abnormal expression of non-coding RNAs. Circular RNA (circRNA), as one of the non-coding RNAs, plays an essential role in cardiac hypertrophy. However, few studies have systematically analyzed circRNA-related competing endogenous RNA (ceRNA) regulatory networks associated with cardiac hypertrophy. Therefore, we used public databases from online prediction websites to predict and screen differentially expressed mRNAs and miRNAs and ultimately obtained circRNAs related to cardiac hypertrophy. Based on this result, we went on to establish a circRNAs-related ceRNA regulatory network. This study is the first to establish a circRNA-mediated ceRNA regulatory network associated with myocardial hypertrophy. To verify the results of our analysis, we used PCR to verify the differentially expressed mRNAs and miRNAs in animal myocardial hypertrophy model samples. Our findings suggest that three mRNAs (Col12a1, Thbs1, and Tgfbr3), four miRNAs (miR-20a-5p, miR-27b-3p, miR-342-3p, and miR-378a-3p), and four related circRNAs (circ_0002702, circ_0110609, circ_0013751, and circ_0047959) may play a key role in cardiac hypertrophy.
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spelling pubmed-88609012022-02-23 Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy Chen, Yang-Hao Zhong, Ling-Feng Hong, Xia Zhu, Qian-Li Wang, Song-Jie Han, Ji-Bo Huang, Wei-Jian Ye, Bo-Zhi Front Genet Genetics Cardiac hypertrophy is an adaptive cardiac response that accommodates the variable hemodynamic demands of the human body during extended periods of preload or afterload increase. In recent years, an increasing number of studies have pointed to a potential connection between myocardial hypertrophy and abnormal expression of non-coding RNAs. Circular RNA (circRNA), as one of the non-coding RNAs, plays an essential role in cardiac hypertrophy. However, few studies have systematically analyzed circRNA-related competing endogenous RNA (ceRNA) regulatory networks associated with cardiac hypertrophy. Therefore, we used public databases from online prediction websites to predict and screen differentially expressed mRNAs and miRNAs and ultimately obtained circRNAs related to cardiac hypertrophy. Based on this result, we went on to establish a circRNAs-related ceRNA regulatory network. This study is the first to establish a circRNA-mediated ceRNA regulatory network associated with myocardial hypertrophy. To verify the results of our analysis, we used PCR to verify the differentially expressed mRNAs and miRNAs in animal myocardial hypertrophy model samples. Our findings suggest that three mRNAs (Col12a1, Thbs1, and Tgfbr3), four miRNAs (miR-20a-5p, miR-27b-3p, miR-342-3p, and miR-378a-3p), and four related circRNAs (circ_0002702, circ_0110609, circ_0013751, and circ_0047959) may play a key role in cardiac hypertrophy. Frontiers Media S.A. 2022-02-08 /pmc/articles/PMC8860901/ /pubmed/35211156 http://dx.doi.org/10.3389/fgene.2022.781676 Text en Copyright © 2022 Chen, Zhong, Hong, Zhu, Wang, Han, Huang and Ye. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Chen, Yang-Hao
Zhong, Ling-Feng
Hong, Xia
Zhu, Qian-Li
Wang, Song-Jie
Han, Ji-Bo
Huang, Wei-Jian
Ye, Bo-Zhi
Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy
title Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy
title_full Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy
title_fullStr Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy
title_full_unstemmed Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy
title_short Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy
title_sort integrated analysis of circrna-mirna-mrna cerna network in cardiac hypertrophy
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8860901/
https://www.ncbi.nlm.nih.gov/pubmed/35211156
http://dx.doi.org/10.3389/fgene.2022.781676
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