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Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals
Methods on modelling the human brain as a Complex System have increased remarkably in the literature as researchers seek to understand the underlying foundations behind cognition, behaviour, and perception. Computational methods, especially Graph Theory-based methods, have recently contributed signi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8861015/ https://www.ncbi.nlm.nih.gov/pubmed/35190579 http://dx.doi.org/10.1038/s41598-022-06573-1 |
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author | Ioannides, Georgios Kourouklides, Ioannis Astolfi, Alessandro |
author_facet | Ioannides, Georgios Kourouklides, Ioannis Astolfi, Alessandro |
author_sort | Ioannides, Georgios |
collection | PubMed |
description | Methods on modelling the human brain as a Complex System have increased remarkably in the literature as researchers seek to understand the underlying foundations behind cognition, behaviour, and perception. Computational methods, especially Graph Theory-based methods, have recently contributed significantly in understanding the wiring connectivity of the brain, modelling it as a set of nodes connected by edges. Therefore, the brain’s spatiotemporal dynamics can be holistically studied by considering a network, which consists of many neurons, represented by nodes. Various models have been proposed for modelling such neurons. A recently proposed method in training such networks, called full-Force, produces networks that perform tasks with fewer neurons and greater noise robustness than previous least-squares approaches (i.e. FORCE method). In this paper, the first direct applicability of a variant of the full-Force method to biologically-motivated Spiking RNNs (SRNNs) is demonstrated. The SRNN is a graph consisting of modules. Each module is modelled as a Small-World Network (SWN), which is a specific type of a biologically-plausible graph. So, the first direct applicability of a variant of the full-Force method to modular SWNs is demonstrated, evaluated through regression and information theoretic metrics. For the first time, the aforementioned method is applied to spiking neuron models and trained on various real-life Electroencephalography (EEG) signals. To the best of the authors’ knowledge, all the contributions of this paper are novel. Results show that trained SRNNs match EEG signals almost perfectly, while network dynamics can mimic the target dynamics. This demonstrates that the holistic setup of the network model and the neuron model which are both more biologically plausible than previous work, can be tuned into real biological signal dynamics. |
format | Online Article Text |
id | pubmed-8861015 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-88610152022-02-22 Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals Ioannides, Georgios Kourouklides, Ioannis Astolfi, Alessandro Sci Rep Article Methods on modelling the human brain as a Complex System have increased remarkably in the literature as researchers seek to understand the underlying foundations behind cognition, behaviour, and perception. Computational methods, especially Graph Theory-based methods, have recently contributed significantly in understanding the wiring connectivity of the brain, modelling it as a set of nodes connected by edges. Therefore, the brain’s spatiotemporal dynamics can be holistically studied by considering a network, which consists of many neurons, represented by nodes. Various models have been proposed for modelling such neurons. A recently proposed method in training such networks, called full-Force, produces networks that perform tasks with fewer neurons and greater noise robustness than previous least-squares approaches (i.e. FORCE method). In this paper, the first direct applicability of a variant of the full-Force method to biologically-motivated Spiking RNNs (SRNNs) is demonstrated. The SRNN is a graph consisting of modules. Each module is modelled as a Small-World Network (SWN), which is a specific type of a biologically-plausible graph. So, the first direct applicability of a variant of the full-Force method to modular SWNs is demonstrated, evaluated through regression and information theoretic metrics. For the first time, the aforementioned method is applied to spiking neuron models and trained on various real-life Electroencephalography (EEG) signals. To the best of the authors’ knowledge, all the contributions of this paper are novel. Results show that trained SRNNs match EEG signals almost perfectly, while network dynamics can mimic the target dynamics. This demonstrates that the holistic setup of the network model and the neuron model which are both more biologically plausible than previous work, can be tuned into real biological signal dynamics. Nature Publishing Group UK 2022-02-21 /pmc/articles/PMC8861015/ /pubmed/35190579 http://dx.doi.org/10.1038/s41598-022-06573-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ioannides, Georgios Kourouklides, Ioannis Astolfi, Alessandro Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals |
title | Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals |
title_full | Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals |
title_fullStr | Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals |
title_full_unstemmed | Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals |
title_short | Spatiotemporal dynamics in spiking recurrent neural networks using modified-full-FORCE on EEG signals |
title_sort | spatiotemporal dynamics in spiking recurrent neural networks using modified-full-force on eeg signals |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8861015/ https://www.ncbi.nlm.nih.gov/pubmed/35190579 http://dx.doi.org/10.1038/s41598-022-06573-1 |
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