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An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy

BACKGROUND: The tumor microenvironment (TME) plays an important role in the occurrence and development of gastric cancer (GC) and is widely used to assess the treatment outcomes of GC patients. Immunohistochemistry (IHC) and gene sequencing are the main analysis methods for the TME but are limited d...

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Autores principales: Chen, Tao, Li, Xunjun, Mao, Qingyi, Wang, Yiyun, Li, Hanyi, Wang, Chen, Shen, Yuyang, Guo, Erjia, He, Qinglie, Tian, Jie, Zhu, Mansheng, Wu, Jing, Liang, Weiqi, Liu, Hao, Yu, Jiang, Li, Guoxin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8862309/
https://www.ncbi.nlm.nih.gov/pubmed/35189890
http://dx.doi.org/10.1186/s12967-022-03298-7
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author Chen, Tao
Li, Xunjun
Mao, Qingyi
Wang, Yiyun
Li, Hanyi
Wang, Chen
Shen, Yuyang
Guo, Erjia
He, Qinglie
Tian, Jie
Zhu, Mansheng
Wu, Jing
Liang, Weiqi
Liu, Hao
Yu, Jiang
Li, Guoxin
author_facet Chen, Tao
Li, Xunjun
Mao, Qingyi
Wang, Yiyun
Li, Hanyi
Wang, Chen
Shen, Yuyang
Guo, Erjia
He, Qinglie
Tian, Jie
Zhu, Mansheng
Wu, Jing
Liang, Weiqi
Liu, Hao
Yu, Jiang
Li, Guoxin
author_sort Chen, Tao
collection PubMed
description BACKGROUND: The tumor microenvironment (TME) plays an important role in the occurrence and development of gastric cancer (GC) and is widely used to assess the treatment outcomes of GC patients. Immunohistochemistry (IHC) and gene sequencing are the main analysis methods for the TME but are limited due to the subjectivity of observers, the high cost of equipment and the need for professional analysts. METHODS: The ImmunoScore (IS) was developed in the TCGA cohort and validated in GEO cohorts. The Radiomic ImmunoScore (RIS) was developed in the TCGA cohort and validated in the Nanfang cohort. A nomogram was developed and validated in the Nanfang cohort based on RIS and clinical features. RESULTS: For IS, the area under the curves (AUCs) were 0.798 for 2-year overall survival (OS) and 0.873 for 4-year overall survival. For RIS, in the TCGA cohort, the AUCs distinguishing High-IS or Low-IS and predicting prognosis were 0.85 and 0.81, respectively; in the Nanfang cohort, the AUC predicting prognosis was 0.72. The nomogram performed better than the TNM staging system according to the ROC curve (all P < 0.01). Patients with TNM stage II and III in the High-nomogram group were more likely to benefit from adjuvant chemotherapy than Low-nomogram group patients. CONCLUSIONS: The RIS and the nomogram can be used to assess the TME, prognosis and adjuvant chemotherapy benefit of GC patients after radical gastrectomy and are valuable additions to the current TNM staging system. High-nomogram GC patients may benefit more from adjuvant chemotherapy than Low-nomogram GC patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-022-03298-7.
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spelling pubmed-88623092022-02-23 An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy Chen, Tao Li, Xunjun Mao, Qingyi Wang, Yiyun Li, Hanyi Wang, Chen Shen, Yuyang Guo, Erjia He, Qinglie Tian, Jie Zhu, Mansheng Wu, Jing Liang, Weiqi Liu, Hao Yu, Jiang Li, Guoxin J Transl Med Research BACKGROUND: The tumor microenvironment (TME) plays an important role in the occurrence and development of gastric cancer (GC) and is widely used to assess the treatment outcomes of GC patients. Immunohistochemistry (IHC) and gene sequencing are the main analysis methods for the TME but are limited due to the subjectivity of observers, the high cost of equipment and the need for professional analysts. METHODS: The ImmunoScore (IS) was developed in the TCGA cohort and validated in GEO cohorts. The Radiomic ImmunoScore (RIS) was developed in the TCGA cohort and validated in the Nanfang cohort. A nomogram was developed and validated in the Nanfang cohort based on RIS and clinical features. RESULTS: For IS, the area under the curves (AUCs) were 0.798 for 2-year overall survival (OS) and 0.873 for 4-year overall survival. For RIS, in the TCGA cohort, the AUCs distinguishing High-IS or Low-IS and predicting prognosis were 0.85 and 0.81, respectively; in the Nanfang cohort, the AUC predicting prognosis was 0.72. The nomogram performed better than the TNM staging system according to the ROC curve (all P < 0.01). Patients with TNM stage II and III in the High-nomogram group were more likely to benefit from adjuvant chemotherapy than Low-nomogram group patients. CONCLUSIONS: The RIS and the nomogram can be used to assess the TME, prognosis and adjuvant chemotherapy benefit of GC patients after radical gastrectomy and are valuable additions to the current TNM staging system. High-nomogram GC patients may benefit more from adjuvant chemotherapy than Low-nomogram GC patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-022-03298-7. BioMed Central 2022-02-21 /pmc/articles/PMC8862309/ /pubmed/35189890 http://dx.doi.org/10.1186/s12967-022-03298-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Chen, Tao
Li, Xunjun
Mao, Qingyi
Wang, Yiyun
Li, Hanyi
Wang, Chen
Shen, Yuyang
Guo, Erjia
He, Qinglie
Tian, Jie
Zhu, Mansheng
Wu, Jing
Liang, Weiqi
Liu, Hao
Yu, Jiang
Li, Guoxin
An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy
title An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy
title_full An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy
title_fullStr An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy
title_full_unstemmed An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy
title_short An artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy
title_sort artificial intelligence method to assess the tumor microenvironment with treatment outcomes for gastric cancer patients after gastrectomy
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8862309/
https://www.ncbi.nlm.nih.gov/pubmed/35189890
http://dx.doi.org/10.1186/s12967-022-03298-7
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