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Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil

BACKGROUND: Cellulose is the most prevalent biomass and renewable energy source in nature. The hydrolysis of cellulosic biomass to glucose units is essential for the economic exploitation of this natural resource. Cellulase enzyme, which is largely generated by bacteria and fungus, is commonly used...

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Autores principales: Elsababty, Zainab E., Abdel-Aziz, Samir H., Ibrahim, Atef M., Guirgis, Adel A., Dawwam, Ghada E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8864052/
https://www.ncbi.nlm.nih.gov/pubmed/35192092
http://dx.doi.org/10.1186/s43141-022-00317-4
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author Elsababty, Zainab E.
Abdel-Aziz, Samir H.
Ibrahim, Atef M.
Guirgis, Adel A.
Dawwam, Ghada E.
author_facet Elsababty, Zainab E.
Abdel-Aziz, Samir H.
Ibrahim, Atef M.
Guirgis, Adel A.
Dawwam, Ghada E.
author_sort Elsababty, Zainab E.
collection PubMed
description BACKGROUND: Cellulose is the most prevalent biomass and renewable energy source in nature. The hydrolysis of cellulosic biomass to glucose units is essential for the economic exploitation of this natural resource. Cellulase enzyme, which is largely generated by bacteria and fungus, is commonly used to degrade cellulose. Cellulases are used in a variety of industries, including bioethanol manufacturing, textiles, detergents, drugs, food, and paper. As part of our quest to find an efficient biocatalyst for the hydrolysis of cellulosic biomass, we describe the amplification, cloning, and sequencing of cellulase (cel9z) from Bacillus licheniformis strain Z9, as well as the characterization of the resulting enzyme. RESULTS: Cellulase was partially purified from B. licheniformis strain Z9 using (NH(4))(2)SO(4) precipitation and Sephadex G-100 gel column chromatography with 356.5 U/mg specific activity, 2.1-purification fold, and 3.07 % yield. The nucleotide sequence of the cellulase gene was deposited to the GenBank, B. licheniformis strain Z9 cellulase (cel9z) gene, under accession number MK814929. This corresponds to 1453 nucleotides gene and encodes for a protein composed of 484 amino acids. Comparison of deduced amino acids sequence to other related cellulases showed that the enzyme cel9z can be classified as a glycoside hydrolase family 9. SDS-PAGE analysis of the purified enzyme revealed that the molecular mass was 54.5 kDa. The optimal enzyme activity was observed at pH 7.4 and 30 °C. The enzyme was found to be strongly inhibited by Mg(2+) and Na(+), whereas strongly activated by Fe(3+), Cu(2+), and Ca(2+). CONCLUSIONS: B. licheniformis strain Z9 and its cellulase gene can be further utilized for recombinant production of cellulases for industrial application. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s43141-022-00317-4.
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spelling pubmed-88640522022-03-08 Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil Elsababty, Zainab E. Abdel-Aziz, Samir H. Ibrahim, Atef M. Guirgis, Adel A. Dawwam, Ghada E. J Genet Eng Biotechnol Research BACKGROUND: Cellulose is the most prevalent biomass and renewable energy source in nature. The hydrolysis of cellulosic biomass to glucose units is essential for the economic exploitation of this natural resource. Cellulase enzyme, which is largely generated by bacteria and fungus, is commonly used to degrade cellulose. Cellulases are used in a variety of industries, including bioethanol manufacturing, textiles, detergents, drugs, food, and paper. As part of our quest to find an efficient biocatalyst for the hydrolysis of cellulosic biomass, we describe the amplification, cloning, and sequencing of cellulase (cel9z) from Bacillus licheniformis strain Z9, as well as the characterization of the resulting enzyme. RESULTS: Cellulase was partially purified from B. licheniformis strain Z9 using (NH(4))(2)SO(4) precipitation and Sephadex G-100 gel column chromatography with 356.5 U/mg specific activity, 2.1-purification fold, and 3.07 % yield. The nucleotide sequence of the cellulase gene was deposited to the GenBank, B. licheniformis strain Z9 cellulase (cel9z) gene, under accession number MK814929. This corresponds to 1453 nucleotides gene and encodes for a protein composed of 484 amino acids. Comparison of deduced amino acids sequence to other related cellulases showed that the enzyme cel9z can be classified as a glycoside hydrolase family 9. SDS-PAGE analysis of the purified enzyme revealed that the molecular mass was 54.5 kDa. The optimal enzyme activity was observed at pH 7.4 and 30 °C. The enzyme was found to be strongly inhibited by Mg(2+) and Na(+), whereas strongly activated by Fe(3+), Cu(2+), and Ca(2+). CONCLUSIONS: B. licheniformis strain Z9 and its cellulase gene can be further utilized for recombinant production of cellulases for industrial application. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s43141-022-00317-4. Springer Berlin Heidelberg 2022-02-22 /pmc/articles/PMC8864052/ /pubmed/35192092 http://dx.doi.org/10.1186/s43141-022-00317-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research
Elsababty, Zainab E.
Abdel-Aziz, Samir H.
Ibrahim, Atef M.
Guirgis, Adel A.
Dawwam, Ghada E.
Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil
title Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil
title_full Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil
title_fullStr Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil
title_full_unstemmed Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil
title_short Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil
title_sort purification, biochemical characterization, and molecular cloning of cellulase from bacillus licheniformis strain z9 isolated from soil
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8864052/
https://www.ncbi.nlm.nih.gov/pubmed/35192092
http://dx.doi.org/10.1186/s43141-022-00317-4
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