Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75

Diatoms (Bacillariophyceae) are a major constituent of the phytoplankton and have a universally recognized ecological importance. Between 1,000 and 1,300 diatom genera have been described in the literature, but only 10 nuclear genomes have been published and made available to the public up to date....

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Autores principales: Sorokina, Maria, Barth, Emanuel, Zulfiqar, Mahnoor, Kwantes, Michiel, Pohnert, Georg, Steinbeck, Christoph
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Data Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8866145/
https://www.ncbi.nlm.nih.gov/pubmed/35242913
http://dx.doi.org/10.1016/j.dib.2022.107931
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author Sorokina, Maria
Barth, Emanuel
Zulfiqar, Mahnoor
Kwantes, Michiel
Pohnert, Georg
Steinbeck, Christoph
author_facet Sorokina, Maria
Barth, Emanuel
Zulfiqar, Mahnoor
Kwantes, Michiel
Pohnert, Georg
Steinbeck, Christoph
author_sort Sorokina, Maria
collection PubMed
description Diatoms (Bacillariophyceae) are a major constituent of the phytoplankton and have a universally recognized ecological importance. Between 1,000 and 1,300 diatom genera have been described in the literature, but only 10 nuclear genomes have been published and made available to the public up to date. Skeletonema costatum is a cosmopolitan marine diatom, principally occurring in coastal regions, and is one of the most abundant members of the Skeletonema genus. Here we present a draft assembly of the Skeletonema cf. costatum RCC75 genome, obtained from PacBio and Illumina NovaSeq data. This dataset will expand the knowledge of the Bacillariophyceae genetics and contribute to the global understanding of phytoplankton's physiological, ecological, and environmental functioning.
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spelling pubmed-88661452022-03-02 Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75 Sorokina, Maria Barth, Emanuel Zulfiqar, Mahnoor Kwantes, Michiel Pohnert, Georg Steinbeck, Christoph Data Brief Data Article Diatoms (Bacillariophyceae) are a major constituent of the phytoplankton and have a universally recognized ecological importance. Between 1,000 and 1,300 diatom genera have been described in the literature, but only 10 nuclear genomes have been published and made available to the public up to date. Skeletonema costatum is a cosmopolitan marine diatom, principally occurring in coastal regions, and is one of the most abundant members of the Skeletonema genus. Here we present a draft assembly of the Skeletonema cf. costatum RCC75 genome, obtained from PacBio and Illumina NovaSeq data. This dataset will expand the knowledge of the Bacillariophyceae genetics and contribute to the global understanding of phytoplankton's physiological, ecological, and environmental functioning. Elsevier 2022-02-05 /pmc/articles/PMC8866145/ /pubmed/35242913 http://dx.doi.org/10.1016/j.dib.2022.107931 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Sorokina, Maria
Barth, Emanuel
Zulfiqar, Mahnoor
Kwantes, Michiel
Pohnert, Georg
Steinbeck, Christoph
Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75
title Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75
title_full Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75
title_fullStr Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75
title_full_unstemmed Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75
title_short Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75
title_sort draft genome assembly and sequencing dataset of the marine diatom skeletonema cf. costatum rcc75
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8866145/
https://www.ncbi.nlm.nih.gov/pubmed/35242913
http://dx.doi.org/10.1016/j.dib.2022.107931
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