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Simulating COVID19 transmission from observed movement

Current models of COVID-19 transmission predict infection from reported or assumed interactions. Here we leverage high-resolution observations of interaction to simulate infectious processes. Ultra-Wide Radio Frequency Identification (RFID) systems were employed to track the real-time physical movem...

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Autores principales: Zhang, Yi, Tao, Yudong, Shyu, Mei-Ling, Perry, Lynn K., Warde, Prem R., Messinger, Daniel S., Song, Chaoming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8866419/
https://www.ncbi.nlm.nih.gov/pubmed/35197528
http://dx.doi.org/10.1038/s41598-022-07043-4
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author Zhang, Yi
Tao, Yudong
Shyu, Mei-Ling
Perry, Lynn K.
Warde, Prem R.
Messinger, Daniel S.
Song, Chaoming
author_facet Zhang, Yi
Tao, Yudong
Shyu, Mei-Ling
Perry, Lynn K.
Warde, Prem R.
Messinger, Daniel S.
Song, Chaoming
author_sort Zhang, Yi
collection PubMed
description Current models of COVID-19 transmission predict infection from reported or assumed interactions. Here we leverage high-resolution observations of interaction to simulate infectious processes. Ultra-Wide Radio Frequency Identification (RFID) systems were employed to track the real-time physical movements and directional orientation of children and their teachers in 4 preschool classes over a total of 34 observations. An agent-based transmission model combined observed interaction patterns (individual distance and orientation) with CDC-published risk guidelines to estimate the transmission impact of an infected patient zero attending class on the proportion of overall infections, the average transmission rate, and the time lag to the appearance of symptomatic individuals. These metrics highlighted the prophylactic role of decreased classroom density and teacher vaccinations. Reduction of classroom density to half capacity was associated with an 18.2% drop in overall infection proportion while teacher vaccination receipt was associated with a 25.3% drop. Simulation results of classroom transmission dynamics may inform public policy in the face of COVID-19 and similar infectious threats.
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spelling pubmed-88664192022-02-25 Simulating COVID19 transmission from observed movement Zhang, Yi Tao, Yudong Shyu, Mei-Ling Perry, Lynn K. Warde, Prem R. Messinger, Daniel S. Song, Chaoming Sci Rep Article Current models of COVID-19 transmission predict infection from reported or assumed interactions. Here we leverage high-resolution observations of interaction to simulate infectious processes. Ultra-Wide Radio Frequency Identification (RFID) systems were employed to track the real-time physical movements and directional orientation of children and their teachers in 4 preschool classes over a total of 34 observations. An agent-based transmission model combined observed interaction patterns (individual distance and orientation) with CDC-published risk guidelines to estimate the transmission impact of an infected patient zero attending class on the proportion of overall infections, the average transmission rate, and the time lag to the appearance of symptomatic individuals. These metrics highlighted the prophylactic role of decreased classroom density and teacher vaccinations. Reduction of classroom density to half capacity was associated with an 18.2% drop in overall infection proportion while teacher vaccination receipt was associated with a 25.3% drop. Simulation results of classroom transmission dynamics may inform public policy in the face of COVID-19 and similar infectious threats. Nature Publishing Group UK 2022-02-23 /pmc/articles/PMC8866419/ /pubmed/35197528 http://dx.doi.org/10.1038/s41598-022-07043-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Zhang, Yi
Tao, Yudong
Shyu, Mei-Ling
Perry, Lynn K.
Warde, Prem R.
Messinger, Daniel S.
Song, Chaoming
Simulating COVID19 transmission from observed movement
title Simulating COVID19 transmission from observed movement
title_full Simulating COVID19 transmission from observed movement
title_fullStr Simulating COVID19 transmission from observed movement
title_full_unstemmed Simulating COVID19 transmission from observed movement
title_short Simulating COVID19 transmission from observed movement
title_sort simulating covid19 transmission from observed movement
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8866419/
https://www.ncbi.nlm.nih.gov/pubmed/35197528
http://dx.doi.org/10.1038/s41598-022-07043-4
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