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Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein

Dengue virus (DENV) is the causative agent of dengue fever. Annually, there are about 400 million new cases of dengue worldwide, and so far there is no specific treatment against this disease. The NS5 protein is the largest and most conserved viral protein among flaviviruses and is considered a ther...

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Autores principales: García-Ariza, Leidy L., Rocha-Roa, Cristian, Padilla-Sanabria, Leonardo, Castaño-Osorio, Jhon C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8867075/
https://www.ncbi.nlm.nih.gov/pubmed/35223766
http://dx.doi.org/10.3389/fchem.2022.637266
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author García-Ariza, Leidy L.
Rocha-Roa, Cristian
Padilla-Sanabria, Leonardo
Castaño-Osorio, Jhon C.
author_facet García-Ariza, Leidy L.
Rocha-Roa, Cristian
Padilla-Sanabria, Leonardo
Castaño-Osorio, Jhon C.
author_sort García-Ariza, Leidy L.
collection PubMed
description Dengue virus (DENV) is the causative agent of dengue fever. Annually, there are about 400 million new cases of dengue worldwide, and so far there is no specific treatment against this disease. The NS5 protein is the largest and most conserved viral protein among flaviviruses and is considered a therapeutic target of great interest. This study aims to search drug-like compounds for possible inhibitors of the NS5 protein in the four serotypes of DENV. Using a virtual screening from a ∼642,759-compound database, we suggest 18 compounds with NS5 binding and highlight the best compound per region, in the methyltransferase and RNA-dependent RNA polymerase domains. These compounds interact mainly with the amino acids of the catalytic sites and/or are involved in processes of protein activity. The identified compounds presented physicochemical and pharmacological properties of interest for their use as possible drugs; furthermore, we found that some of these compounds do not affect cell viability in Huh-7; therefore, we suggest evaluating these compounds in vitro as candidates in future research.
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spelling pubmed-88670752022-02-25 Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein García-Ariza, Leidy L. Rocha-Roa, Cristian Padilla-Sanabria, Leonardo Castaño-Osorio, Jhon C. Front Chem Chemistry Dengue virus (DENV) is the causative agent of dengue fever. Annually, there are about 400 million new cases of dengue worldwide, and so far there is no specific treatment against this disease. The NS5 protein is the largest and most conserved viral protein among flaviviruses and is considered a therapeutic target of great interest. This study aims to search drug-like compounds for possible inhibitors of the NS5 protein in the four serotypes of DENV. Using a virtual screening from a ∼642,759-compound database, we suggest 18 compounds with NS5 binding and highlight the best compound per region, in the methyltransferase and RNA-dependent RNA polymerase domains. These compounds interact mainly with the amino acids of the catalytic sites and/or are involved in processes of protein activity. The identified compounds presented physicochemical and pharmacological properties of interest for their use as possible drugs; furthermore, we found that some of these compounds do not affect cell viability in Huh-7; therefore, we suggest evaluating these compounds in vitro as candidates in future research. Frontiers Media S.A. 2022-02-10 /pmc/articles/PMC8867075/ /pubmed/35223766 http://dx.doi.org/10.3389/fchem.2022.637266 Text en Copyright © 2022 García-Ariza, Rocha-Roa, Padilla-Sanabria and Castaño-Osorio. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Chemistry
García-Ariza, Leidy L.
Rocha-Roa, Cristian
Padilla-Sanabria, Leonardo
Castaño-Osorio, Jhon C.
Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein
title Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein
title_full Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein
title_fullStr Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein
title_full_unstemmed Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein
title_short Virtual Screening of Drug-Like Compounds as Potential Inhibitors of the Dengue Virus NS5 Protein
title_sort virtual screening of drug-like compounds as potential inhibitors of the dengue virus ns5 protein
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8867075/
https://www.ncbi.nlm.nih.gov/pubmed/35223766
http://dx.doi.org/10.3389/fchem.2022.637266
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