Cargando…

Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance

The outbreak of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) emerged in December 2019 and caused coronavirus disease 2019 (COVID-19), which causes pneumonia and severe acute respiratory distress syndrome. It is a highly infectious pathogen that promptly spread. Like other beta corona...

Descripción completa

Detalles Bibliográficos
Autores principales: Anjum, Farah, Mohammad, Taj, Asrani, Purva, Shafie, Alaa, Singh, Shailza, Yadav, Dharmendra Kumar, Uversky, Vladimir N., Hassan, Md Imtaiyaz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8869350/
https://www.ncbi.nlm.nih.gov/pubmed/35211823
http://dx.doi.org/10.1007/s11010-022-04393-5
_version_ 1784656477027303424
author Anjum, Farah
Mohammad, Taj
Asrani, Purva
Shafie, Alaa
Singh, Shailza
Yadav, Dharmendra Kumar
Uversky, Vladimir N.
Hassan, Md Imtaiyaz
author_facet Anjum, Farah
Mohammad, Taj
Asrani, Purva
Shafie, Alaa
Singh, Shailza
Yadav, Dharmendra Kumar
Uversky, Vladimir N.
Hassan, Md Imtaiyaz
author_sort Anjum, Farah
collection PubMed
description The outbreak of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) emerged in December 2019 and caused coronavirus disease 2019 (COVID-19), which causes pneumonia and severe acute respiratory distress syndrome. It is a highly infectious pathogen that promptly spread. Like other beta coronaviruses, SARS‐CoV‐2 encodes some non-structural proteins (NSPs), playing crucial roles in viral transcription and replication. NSPs likely have essential roles in viral pathogenesis by manipulating many cellular processes. We performed a sequence-based analysis of NSPs to get insights into their intrinsic disorders, and their functions in viral replication were annotated and discussed in detail. Here, we provide newer insights into the structurally disordered regions of SARS-CoV-2 NSPs. Our analysis reveals that the SARS-CoV-2 proteome has a chunk of the disordered region that might be responsible for increasing its virulence. In addition, mutations in these regions are presumably responsible for drug and vaccine resistance. These findings suggested that the structurally disordered regions of SARS-CoV-2 NSPs might be invulnerable in COVID-19.
format Online
Article
Text
id pubmed-8869350
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Springer US
record_format MEDLINE/PubMed
spelling pubmed-88693502022-02-25 Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance Anjum, Farah Mohammad, Taj Asrani, Purva Shafie, Alaa Singh, Shailza Yadav, Dharmendra Kumar Uversky, Vladimir N. Hassan, Md Imtaiyaz Mol Cell Biochem Article The outbreak of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) emerged in December 2019 and caused coronavirus disease 2019 (COVID-19), which causes pneumonia and severe acute respiratory distress syndrome. It is a highly infectious pathogen that promptly spread. Like other beta coronaviruses, SARS‐CoV‐2 encodes some non-structural proteins (NSPs), playing crucial roles in viral transcription and replication. NSPs likely have essential roles in viral pathogenesis by manipulating many cellular processes. We performed a sequence-based analysis of NSPs to get insights into their intrinsic disorders, and their functions in viral replication were annotated and discussed in detail. Here, we provide newer insights into the structurally disordered regions of SARS-CoV-2 NSPs. Our analysis reveals that the SARS-CoV-2 proteome has a chunk of the disordered region that might be responsible for increasing its virulence. In addition, mutations in these regions are presumably responsible for drug and vaccine resistance. These findings suggested that the structurally disordered regions of SARS-CoV-2 NSPs might be invulnerable in COVID-19. Springer US 2022-02-24 2022 /pmc/articles/PMC8869350/ /pubmed/35211823 http://dx.doi.org/10.1007/s11010-022-04393-5 Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Anjum, Farah
Mohammad, Taj
Asrani, Purva
Shafie, Alaa
Singh, Shailza
Yadav, Dharmendra Kumar
Uversky, Vladimir N.
Hassan, Md Imtaiyaz
Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance
title Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance
title_full Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance
title_fullStr Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance
title_full_unstemmed Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance
title_short Identification of intrinsically disorder regions in non-structural proteins of SARS-CoV-2: New insights into drug and vaccine resistance
title_sort identification of intrinsically disorder regions in non-structural proteins of sars-cov-2: new insights into drug and vaccine resistance
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8869350/
https://www.ncbi.nlm.nih.gov/pubmed/35211823
http://dx.doi.org/10.1007/s11010-022-04393-5
work_keys_str_mv AT anjumfarah identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance
AT mohammadtaj identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance
AT asranipurva identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance
AT shafiealaa identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance
AT singhshailza identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance
AT yadavdharmendrakumar identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance
AT uverskyvladimirn identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance
AT hassanmdimtaiyaz identificationofintrinsicallydisorderregionsinnonstructuralproteinsofsarscov2newinsightsintodrugandvaccineresistance