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Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics

The differentiation of cultivars is carried out by means of morphological descriptors, in addition to molecular markers. In this work, near-infrared spectroscopy (NIR) and chemometric techniques were used to develop classification models for two different commercial sesame cultivars (Sesamum indicum...

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Detalles Bibliográficos
Autores principales: Panero, Francisco dos Santos, Smiderle, Oscar, Panero, João S., Faria, Fernando S. D. V., Panero, Pedro dos S., Rodriguez, Anselmo F. R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8869549/
https://www.ncbi.nlm.nih.gov/pubmed/35200330
http://dx.doi.org/10.3390/bios12020069
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author Panero, Francisco dos Santos
Smiderle, Oscar
Panero, João S.
Faria, Fernando S. D. V.
Panero, Pedro dos S.
Rodriguez, Anselmo F. R.
author_facet Panero, Francisco dos Santos
Smiderle, Oscar
Panero, João S.
Faria, Fernando S. D. V.
Panero, Pedro dos S.
Rodriguez, Anselmo F. R.
author_sort Panero, Francisco dos Santos
collection PubMed
description The differentiation of cultivars is carried out by means of morphological descriptors, in addition to molecular markers. In this work, near-infrared spectroscopy (NIR) and chemometric techniques were used to develop classification models for two different commercial sesame cultivars (Sesamum indicum) and 3 different strains. The diffuse reflectance spectra were recorded in the region of 700 to 2500 nm. Based on the application of chemometric techniques: principal component analysis—PCA, hierarchical cluster analysis—HCA, k-nearest neighbor—KNN and the flexible independent modeling of class analogy—SIMCA, from the infrared spectra in the near region, it was possible to perform the genotyping of two sesame cultivars (BRS Seda and BRS Anahí), and to classify these cultivars with 3 different sesame strains, obtaining 100% accurate results. Due to the good results obtained with the implemented models, the potential of the methods for a possible realization of forensic, fast and non-destructive authentication, in intact sesame seeds was evident.
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spelling pubmed-88695492022-02-25 Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics Panero, Francisco dos Santos Smiderle, Oscar Panero, João S. Faria, Fernando S. D. V. Panero, Pedro dos S. Rodriguez, Anselmo F. R. Biosensors (Basel) Article The differentiation of cultivars is carried out by means of morphological descriptors, in addition to molecular markers. In this work, near-infrared spectroscopy (NIR) and chemometric techniques were used to develop classification models for two different commercial sesame cultivars (Sesamum indicum) and 3 different strains. The diffuse reflectance spectra were recorded in the region of 700 to 2500 nm. Based on the application of chemometric techniques: principal component analysis—PCA, hierarchical cluster analysis—HCA, k-nearest neighbor—KNN and the flexible independent modeling of class analogy—SIMCA, from the infrared spectra in the near region, it was possible to perform the genotyping of two sesame cultivars (BRS Seda and BRS Anahí), and to classify these cultivars with 3 different sesame strains, obtaining 100% accurate results. Due to the good results obtained with the implemented models, the potential of the methods for a possible realization of forensic, fast and non-destructive authentication, in intact sesame seeds was evident. MDPI 2022-01-26 /pmc/articles/PMC8869549/ /pubmed/35200330 http://dx.doi.org/10.3390/bios12020069 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Panero, Francisco dos Santos
Smiderle, Oscar
Panero, João S.
Faria, Fernando S. D. V.
Panero, Pedro dos S.
Rodriguez, Anselmo F. R.
Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics
title Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics
title_full Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics
title_fullStr Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics
title_full_unstemmed Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics
title_short Non-Destructive Genotyping of Cultivars and Strains of Sesame through NIR Spectroscopy and Chemometrics
title_sort non-destructive genotyping of cultivars and strains of sesame through nir spectroscopy and chemometrics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8869549/
https://www.ncbi.nlm.nih.gov/pubmed/35200330
http://dx.doi.org/10.3390/bios12020069
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