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A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model

Early diagnosis of diabetic retinopathy (DR) is of critical importance to suppress severe damage to the retina and/or vision loss. In this study, an optical coherence tomography (OCT)-based computer-aided diagnosis (CAD) method is proposed to detect DR early using structural 3D retinal scans. This s...

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Autores principales: Elsharkawy, Mohamed, Sharafeldeen, Ahmed, Soliman, Ahmed, Khalifa, Fahmi, Ghazal, Mohammed, El-Daydamony, Eman, Atwan, Ahmed, Sandhu, Harpal Singh, El-Baz, Ayman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8871295/
https://www.ncbi.nlm.nih.gov/pubmed/35204552
http://dx.doi.org/10.3390/diagnostics12020461
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author Elsharkawy, Mohamed
Sharafeldeen, Ahmed
Soliman, Ahmed
Khalifa, Fahmi
Ghazal, Mohammed
El-Daydamony, Eman
Atwan, Ahmed
Sandhu, Harpal Singh
El-Baz, Ayman
author_facet Elsharkawy, Mohamed
Sharafeldeen, Ahmed
Soliman, Ahmed
Khalifa, Fahmi
Ghazal, Mohammed
El-Daydamony, Eman
Atwan, Ahmed
Sandhu, Harpal Singh
El-Baz, Ayman
author_sort Elsharkawy, Mohamed
collection PubMed
description Early diagnosis of diabetic retinopathy (DR) is of critical importance to suppress severe damage to the retina and/or vision loss. In this study, an optical coherence tomography (OCT)-based computer-aided diagnosis (CAD) method is proposed to detect DR early using structural 3D retinal scans. This system uses prior shape knowledge to automatically segment all retinal layers of the 3D-OCT scans using an adaptive, appearance-based method. After the segmentation step, novel texture features are extracted from the segmented layers of the OCT B-scans volume for DR diagnosis. For every layer, Markov–Gibbs random field (MGRF) model is used to extract the 2nd-order reflectivity. In order to represent the extracted image-derived features, we employ cumulative distribution function (CDF) descriptors. For layer-wise classification in 3D volume, using the extracted Gibbs energy feature, an artificial neural network (ANN) is fed the extracted feature for every layer. Finally, the classification outputs for all twelve layers are fused using a majority voting schema for global subject diagnosis. A cohort of 188 3D-OCT subjects are used for system evaluation using different k-fold validation techniques and different validation metrics. Accuracy of [Formula: see text] , [Formula: see text] , and [Formula: see text] are achieved using 4-, 5-, and 10-fold cross-validation, respectively. Additional comparison with deep learning networks, which represent the state-of-the-art, documented the promise of our system’s ability to diagnose the DR early.
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spelling pubmed-88712952022-02-25 A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model Elsharkawy, Mohamed Sharafeldeen, Ahmed Soliman, Ahmed Khalifa, Fahmi Ghazal, Mohammed El-Daydamony, Eman Atwan, Ahmed Sandhu, Harpal Singh El-Baz, Ayman Diagnostics (Basel) Article Early diagnosis of diabetic retinopathy (DR) is of critical importance to suppress severe damage to the retina and/or vision loss. In this study, an optical coherence tomography (OCT)-based computer-aided diagnosis (CAD) method is proposed to detect DR early using structural 3D retinal scans. This system uses prior shape knowledge to automatically segment all retinal layers of the 3D-OCT scans using an adaptive, appearance-based method. After the segmentation step, novel texture features are extracted from the segmented layers of the OCT B-scans volume for DR diagnosis. For every layer, Markov–Gibbs random field (MGRF) model is used to extract the 2nd-order reflectivity. In order to represent the extracted image-derived features, we employ cumulative distribution function (CDF) descriptors. For layer-wise classification in 3D volume, using the extracted Gibbs energy feature, an artificial neural network (ANN) is fed the extracted feature for every layer. Finally, the classification outputs for all twelve layers are fused using a majority voting schema for global subject diagnosis. A cohort of 188 3D-OCT subjects are used for system evaluation using different k-fold validation techniques and different validation metrics. Accuracy of [Formula: see text] , [Formula: see text] , and [Formula: see text] are achieved using 4-, 5-, and 10-fold cross-validation, respectively. Additional comparison with deep learning networks, which represent the state-of-the-art, documented the promise of our system’s ability to diagnose the DR early. MDPI 2022-02-11 /pmc/articles/PMC8871295/ /pubmed/35204552 http://dx.doi.org/10.3390/diagnostics12020461 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Elsharkawy, Mohamed
Sharafeldeen, Ahmed
Soliman, Ahmed
Khalifa, Fahmi
Ghazal, Mohammed
El-Daydamony, Eman
Atwan, Ahmed
Sandhu, Harpal Singh
El-Baz, Ayman
A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model
title A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model
title_full A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model
title_fullStr A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model
title_full_unstemmed A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model
title_short A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model
title_sort novel computer-aided diagnostic system for early detection of diabetic retinopathy using 3d-oct higher-order spatial appearance model
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8871295/
https://www.ncbi.nlm.nih.gov/pubmed/35204552
http://dx.doi.org/10.3390/diagnostics12020461
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