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A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study

Radiomics is rapidly advancing in precision diagnostics and cancer treatment. However, there are several challenges that need to be addressed before translation to clinical use. This study presents an ad-hoc weighted statistical framework to explore radiomic biomarkers for a better characterization...

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Autores principales: Castaldo, Rossana, Garbino, Nunzia, Cavaliere, Carlo, Incoronato, Mariarosaria, Basso, Luca, Cuocolo, Renato, Pace, Leonardo, Salvatore, Marco, Franzese, Monica, Nicolai, Emanuele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8871349/
https://www.ncbi.nlm.nih.gov/pubmed/35204589
http://dx.doi.org/10.3390/diagnostics12020499
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author Castaldo, Rossana
Garbino, Nunzia
Cavaliere, Carlo
Incoronato, Mariarosaria
Basso, Luca
Cuocolo, Renato
Pace, Leonardo
Salvatore, Marco
Franzese, Monica
Nicolai, Emanuele
author_facet Castaldo, Rossana
Garbino, Nunzia
Cavaliere, Carlo
Incoronato, Mariarosaria
Basso, Luca
Cuocolo, Renato
Pace, Leonardo
Salvatore, Marco
Franzese, Monica
Nicolai, Emanuele
author_sort Castaldo, Rossana
collection PubMed
description Radiomics is rapidly advancing in precision diagnostics and cancer treatment. However, there are several challenges that need to be addressed before translation to clinical use. This study presents an ad-hoc weighted statistical framework to explore radiomic biomarkers for a better characterization of the radiogenomic phenotypes in breast cancer. Thirty-six female patients with breast cancer were enrolled in this study. Radiomic features were extracted from MRI and PET imaging techniques for malignant and healthy lesions in each patient. To reduce within-subject bias, the ratio of radiomic features extracted from both lesions was calculated for each patient. Radiomic features were further normalized, comparing the z-score, quantile, and whitening normalization methods to reduce between-subjects bias. After feature reduction by Spearman’s correlation, a methodological approach based on a principal component analysis (PCA) was applied. The results were compared and validated on twenty-seven patients to investigate the tumor grade, Ki-67 index, and molecular cancer subtypes using classification methods (LogitBoost, random forest, and linear discriminant analysis). The classification techniques achieved high area-under-the-curve values with one PC that was calculated by normalizing the radiomic features via the quantile method. This pilot study helped us to establish a robust framework of analysis to generate a combined radiomic signature, which may lead to more precise breast cancer prognosis.
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spelling pubmed-88713492022-02-25 A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study Castaldo, Rossana Garbino, Nunzia Cavaliere, Carlo Incoronato, Mariarosaria Basso, Luca Cuocolo, Renato Pace, Leonardo Salvatore, Marco Franzese, Monica Nicolai, Emanuele Diagnostics (Basel) Article Radiomics is rapidly advancing in precision diagnostics and cancer treatment. However, there are several challenges that need to be addressed before translation to clinical use. This study presents an ad-hoc weighted statistical framework to explore radiomic biomarkers for a better characterization of the radiogenomic phenotypes in breast cancer. Thirty-six female patients with breast cancer were enrolled in this study. Radiomic features were extracted from MRI and PET imaging techniques for malignant and healthy lesions in each patient. To reduce within-subject bias, the ratio of radiomic features extracted from both lesions was calculated for each patient. Radiomic features were further normalized, comparing the z-score, quantile, and whitening normalization methods to reduce between-subjects bias. After feature reduction by Spearman’s correlation, a methodological approach based on a principal component analysis (PCA) was applied. The results were compared and validated on twenty-seven patients to investigate the tumor grade, Ki-67 index, and molecular cancer subtypes using classification methods (LogitBoost, random forest, and linear discriminant analysis). The classification techniques achieved high area-under-the-curve values with one PC that was calculated by normalizing the radiomic features via the quantile method. This pilot study helped us to establish a robust framework of analysis to generate a combined radiomic signature, which may lead to more precise breast cancer prognosis. MDPI 2022-02-15 /pmc/articles/PMC8871349/ /pubmed/35204589 http://dx.doi.org/10.3390/diagnostics12020499 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Castaldo, Rossana
Garbino, Nunzia
Cavaliere, Carlo
Incoronato, Mariarosaria
Basso, Luca
Cuocolo, Renato
Pace, Leonardo
Salvatore, Marco
Franzese, Monica
Nicolai, Emanuele
A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study
title A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study
title_full A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study
title_fullStr A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study
title_full_unstemmed A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study
title_short A Complex Radiomic Signature in Luminal Breast Cancer from a Weighted Statistical Framework: A Pilot Study
title_sort complex radiomic signature in luminal breast cancer from a weighted statistical framework: a pilot study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8871349/
https://www.ncbi.nlm.nih.gov/pubmed/35204589
http://dx.doi.org/10.3390/diagnostics12020499
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