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Automatic estimation of knee effusion from limited MRI data
Knee effusion is a common comorbidity in osteoarthritis. To quantify the amount of effusion, semi quantitative assessment scales have been developed that classify fluid levels on an integer scale from 0 to 3. In this work, we investigated the use of a neural network (NN) that used MRI Osteoarthritis...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8873489/ https://www.ncbi.nlm.nih.gov/pubmed/35210490 http://dx.doi.org/10.1038/s41598-022-07092-9 |
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author | Raman, Sandhya Gold, Garry E. Rosen, Matthew S. Sveinsson, Bragi |
author_facet | Raman, Sandhya Gold, Garry E. Rosen, Matthew S. Sveinsson, Bragi |
author_sort | Raman, Sandhya |
collection | PubMed |
description | Knee effusion is a common comorbidity in osteoarthritis. To quantify the amount of effusion, semi quantitative assessment scales have been developed that classify fluid levels on an integer scale from 0 to 3. In this work, we investigated the use of a neural network (NN) that used MRI Osteoarthritis Knee Scores effusion-synovitis (MOAKS-ES) values to distinguish physiologic fluid levels from higher fluid levels in MR images of the knee. We evaluate its effectiveness on low-resolution images to examine its potential in low-field, low-cost MRI. We created a dense NN (dNN) for detecting effusion, defined as a nonzero MOAKS-ES score, from MRI scans. Both the training and performance evaluation of the network were conducted using public radiological data from the Osteoarthritis Initiative (OAI). The model was trained using sagittal turbo-spin-echo (TSE) MR images from 1628 knees. The accuracy was compared to VGG16, a commonly used convolutional classification network. Robustness of the dNN was assessed by adding zero-mean Gaussian noise to the test images with a standard deviation of 5–30% of the maximum test data intensity. Also, inference was performed on a test data set of 163 knees, which includes a smaller test set of 36 knees that was also assessed by a musculoskeletal radiologist and the performance of the dNN and the radiologist compared. For the larger test data set, the dNN performed with an average accuracy of 62%. In addition, the network proved robust to noise, classifying the noisy images with minimal degradation to accuracy. When given MRI scans with 5% Gaussian noise, the network performed similarly, with an average accuracy of 61%. For the smaller 36-knee test data set, assessed both by the dNN and by a radiologist, the network performed better than the radiologist on average. Classifying knee effusion from low-resolution images with a similar accuracy as a human radiologist using neural networks is feasible, suggesting automatic assessment of images from low-cost, low-field scanners as a potentially useful assessment tool. |
format | Online Article Text |
id | pubmed-8873489 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-88734892022-02-25 Automatic estimation of knee effusion from limited MRI data Raman, Sandhya Gold, Garry E. Rosen, Matthew S. Sveinsson, Bragi Sci Rep Article Knee effusion is a common comorbidity in osteoarthritis. To quantify the amount of effusion, semi quantitative assessment scales have been developed that classify fluid levels on an integer scale from 0 to 3. In this work, we investigated the use of a neural network (NN) that used MRI Osteoarthritis Knee Scores effusion-synovitis (MOAKS-ES) values to distinguish physiologic fluid levels from higher fluid levels in MR images of the knee. We evaluate its effectiveness on low-resolution images to examine its potential in low-field, low-cost MRI. We created a dense NN (dNN) for detecting effusion, defined as a nonzero MOAKS-ES score, from MRI scans. Both the training and performance evaluation of the network were conducted using public radiological data from the Osteoarthritis Initiative (OAI). The model was trained using sagittal turbo-spin-echo (TSE) MR images from 1628 knees. The accuracy was compared to VGG16, a commonly used convolutional classification network. Robustness of the dNN was assessed by adding zero-mean Gaussian noise to the test images with a standard deviation of 5–30% of the maximum test data intensity. Also, inference was performed on a test data set of 163 knees, which includes a smaller test set of 36 knees that was also assessed by a musculoskeletal radiologist and the performance of the dNN and the radiologist compared. For the larger test data set, the dNN performed with an average accuracy of 62%. In addition, the network proved robust to noise, classifying the noisy images with minimal degradation to accuracy. When given MRI scans with 5% Gaussian noise, the network performed similarly, with an average accuracy of 61%. For the smaller 36-knee test data set, assessed both by the dNN and by a radiologist, the network performed better than the radiologist on average. Classifying knee effusion from low-resolution images with a similar accuracy as a human radiologist using neural networks is feasible, suggesting automatic assessment of images from low-cost, low-field scanners as a potentially useful assessment tool. Nature Publishing Group UK 2022-02-24 /pmc/articles/PMC8873489/ /pubmed/35210490 http://dx.doi.org/10.1038/s41598-022-07092-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Raman, Sandhya Gold, Garry E. Rosen, Matthew S. Sveinsson, Bragi Automatic estimation of knee effusion from limited MRI data |
title | Automatic estimation of knee effusion from limited MRI data |
title_full | Automatic estimation of knee effusion from limited MRI data |
title_fullStr | Automatic estimation of knee effusion from limited MRI data |
title_full_unstemmed | Automatic estimation of knee effusion from limited MRI data |
title_short | Automatic estimation of knee effusion from limited MRI data |
title_sort | automatic estimation of knee effusion from limited mri data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8873489/ https://www.ncbi.nlm.nih.gov/pubmed/35210490 http://dx.doi.org/10.1038/s41598-022-07092-9 |
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