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A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype
The world germplasm collection of the genus Avena contains about 130,000 accessions, of which more than half are cultivated forms. Collection and sharing of passport data and phenotypic traits is carried out by most gene banks. However, genetic data for the stored accessions are rarely collected and...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8873533/ https://www.ncbi.nlm.nih.gov/pubmed/35242942 http://dx.doi.org/10.1016/j.dib.2022.107962 |
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author | Dziubińska, Dorota Bolc, Paulina Kloc, Grzegorz Podyma, Wiesław Boczkowska, Maja |
author_facet | Dziubińska, Dorota Bolc, Paulina Kloc, Grzegorz Podyma, Wiesław Boczkowska, Maja |
author_sort | Dziubińska, Dorota |
collection | PubMed |
description | The world germplasm collection of the genus Avena contains about 130,000 accessions, of which more than half are cultivated forms. Collection and sharing of passport data and phenotypic traits is carried out by most gene banks. However, genetic data for the stored accessions are rarely collected and provided. We present a composite data set consisting of passport data, description of agro-morphological traits, and genotypic data for 54 accessions preserved in the Polish gene bank. All accessions are unique landraces collected during expeditions in Poland. Phenotypic data were obtained from a minimum of 3 years of field trials. Genotypic data resulted from Inter Simple Sequence Repeat (ISSR) markers analysis. The data set was supplemented with meteorological data from a meteorological station located no more than 2 km in a straight line from the experimental plots. This data set can be used in meta-analyzes of germplasm collection diversity data. These data can be valuable to researchers and breeders looking for new sources of variation. The data were used in the research article “Promoting the Use of Common Oat Genetic Resources through Diversity Analysis and Core Collection Construction” [1]. |
format | Online Article Text |
id | pubmed-8873533 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-88735332022-03-02 A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype Dziubińska, Dorota Bolc, Paulina Kloc, Grzegorz Podyma, Wiesław Boczkowska, Maja Data Brief Data Article The world germplasm collection of the genus Avena contains about 130,000 accessions, of which more than half are cultivated forms. Collection and sharing of passport data and phenotypic traits is carried out by most gene banks. However, genetic data for the stored accessions are rarely collected and provided. We present a composite data set consisting of passport data, description of agro-morphological traits, and genotypic data for 54 accessions preserved in the Polish gene bank. All accessions are unique landraces collected during expeditions in Poland. Phenotypic data were obtained from a minimum of 3 years of field trials. Genotypic data resulted from Inter Simple Sequence Repeat (ISSR) markers analysis. The data set was supplemented with meteorological data from a meteorological station located no more than 2 km in a straight line from the experimental plots. This data set can be used in meta-analyzes of germplasm collection diversity data. These data can be valuable to researchers and breeders looking for new sources of variation. The data were used in the research article “Promoting the Use of Common Oat Genetic Resources through Diversity Analysis and Core Collection Construction” [1]. Elsevier 2022-02-16 /pmc/articles/PMC8873533/ /pubmed/35242942 http://dx.doi.org/10.1016/j.dib.2022.107962 Text en © 2022 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Dziubińska, Dorota Bolc, Paulina Kloc, Grzegorz Podyma, Wiesław Boczkowska, Maja A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype |
title | A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype |
title_full | A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype |
title_fullStr | A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype |
title_full_unstemmed | A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype |
title_short | A comprehensive dataset of Avena sativa L. landraces phenotypes and genotype |
title_sort | comprehensive dataset of avena sativa l. landraces phenotypes and genotype |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8873533/ https://www.ncbi.nlm.nih.gov/pubmed/35242942 http://dx.doi.org/10.1016/j.dib.2022.107962 |
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