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Biological Nitrogen Removal Database: A Manually Curated Data Resource

Biological nitrogen removal (BNR) technologies are the most effective approaches for the remediation of environmental nitrogen pollutants from wastewater treatment plants (WWTPs). Presently, research is going on to elucidate the structure and function of BNR microbial communities and optimizing BNR...

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Autores principales: Ngara, Tanyaradzwa R., Zeng, Peiji, Zhang, Houjin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8874995/
https://www.ncbi.nlm.nih.gov/pubmed/35208885
http://dx.doi.org/10.3390/microorganisms10020431
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author Ngara, Tanyaradzwa R.
Zeng, Peiji
Zhang, Houjin
author_facet Ngara, Tanyaradzwa R.
Zeng, Peiji
Zhang, Houjin
author_sort Ngara, Tanyaradzwa R.
collection PubMed
description Biological nitrogen removal (BNR) technologies are the most effective approaches for the remediation of environmental nitrogen pollutants from wastewater treatment plants (WWTPs). Presently, research is going on to elucidate the structure and function of BNR microbial communities and optimizing BNR treatment systems to enhance nitrogen removal efficiency. The literature on BNR microbial communities and experimental datasets is not unified across various repositories, while a uniform resource for the collection, annotation, and structuring of these BNR datasets is still unavailable. Herein, we present the Biological Nitrogen Removal Database (BNRdb), an integrated resource containing various manually curated BNR-related data. At present, BNRdb contains 23,308 microbial strains, 46 gene families, 24 enzymes, 18 reactions, 301 BNR treatment datasets, 860 BNR-associated next-generation sequencing datasets, and 6 common BNR bioreactor systems. BNRdb provides a user-friendly interface enabling interactive data browsing. To our knowledge, BNRdb is the first BNR data resource that systematically integrates BNR data from archaeal, bacterial, and fungal communities. We believe that BNRdb will contribute to a better understanding of BNR process and nitrogen bioremediation research.
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spelling pubmed-88749952022-02-26 Biological Nitrogen Removal Database: A Manually Curated Data Resource Ngara, Tanyaradzwa R. Zeng, Peiji Zhang, Houjin Microorganisms Article Biological nitrogen removal (BNR) technologies are the most effective approaches for the remediation of environmental nitrogen pollutants from wastewater treatment plants (WWTPs). Presently, research is going on to elucidate the structure and function of BNR microbial communities and optimizing BNR treatment systems to enhance nitrogen removal efficiency. The literature on BNR microbial communities and experimental datasets is not unified across various repositories, while a uniform resource for the collection, annotation, and structuring of these BNR datasets is still unavailable. Herein, we present the Biological Nitrogen Removal Database (BNRdb), an integrated resource containing various manually curated BNR-related data. At present, BNRdb contains 23,308 microbial strains, 46 gene families, 24 enzymes, 18 reactions, 301 BNR treatment datasets, 860 BNR-associated next-generation sequencing datasets, and 6 common BNR bioreactor systems. BNRdb provides a user-friendly interface enabling interactive data browsing. To our knowledge, BNRdb is the first BNR data resource that systematically integrates BNR data from archaeal, bacterial, and fungal communities. We believe that BNRdb will contribute to a better understanding of BNR process and nitrogen bioremediation research. MDPI 2022-02-12 /pmc/articles/PMC8874995/ /pubmed/35208885 http://dx.doi.org/10.3390/microorganisms10020431 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ngara, Tanyaradzwa R.
Zeng, Peiji
Zhang, Houjin
Biological Nitrogen Removal Database: A Manually Curated Data Resource
title Biological Nitrogen Removal Database: A Manually Curated Data Resource
title_full Biological Nitrogen Removal Database: A Manually Curated Data Resource
title_fullStr Biological Nitrogen Removal Database: A Manually Curated Data Resource
title_full_unstemmed Biological Nitrogen Removal Database: A Manually Curated Data Resource
title_short Biological Nitrogen Removal Database: A Manually Curated Data Resource
title_sort biological nitrogen removal database: a manually curated data resource
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8874995/
https://www.ncbi.nlm.nih.gov/pubmed/35208885
http://dx.doi.org/10.3390/microorganisms10020431
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