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Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station

Multiple strains of a novel yeast belonging to genus Naganishia were isolated from environmental surfaces aboard the International Space Station (ISS). These strains exhibited a phenotype similar to Titan cell (~10 µm diameter) morphology when grown under a combination of simulated microgravity and...

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Autores principales: Bijlani, Swati, Parker, Ceth, Singh, Nitin K., Sierra, Maria A., Foox, Jonathan, Wang, Clay C. C., Mason, Christopher E., Venkateswaran, Kasthuri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8875396/
https://www.ncbi.nlm.nih.gov/pubmed/35205919
http://dx.doi.org/10.3390/jof8020165
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author Bijlani, Swati
Parker, Ceth
Singh, Nitin K.
Sierra, Maria A.
Foox, Jonathan
Wang, Clay C. C.
Mason, Christopher E.
Venkateswaran, Kasthuri
author_facet Bijlani, Swati
Parker, Ceth
Singh, Nitin K.
Sierra, Maria A.
Foox, Jonathan
Wang, Clay C. C.
Mason, Christopher E.
Venkateswaran, Kasthuri
author_sort Bijlani, Swati
collection PubMed
description Multiple strains of a novel yeast belonging to genus Naganishia were isolated from environmental surfaces aboard the International Space Station (ISS). These strains exhibited a phenotype similar to Titan cell (~10 µm diameter) morphology when grown under a combination of simulated microgravity and 5% CO(2) conditions. Confocal, scanning, and transmission electron microscopy revealed distinct morphological differences between the microgravity-grown cells and the standard Earth gravity-grown cells, including larger cells and thicker cell walls, altered intracellular morphology, modifications to extracellular fimbriae, budding, and the shedding of bud scars. Phylogenetic analyses via multi-locus sequence typing indicated that these ISS strains represented a single species in the genus Naganishia and were clustered with Naganishia diffluens. The name Naganishia tulchinskyi is proposed to accommodate these strains, with IF6SW-B1(T) as the holotype. The gene ontologies were assigned to the cell morphogenesis, microtubule-based response, and response to UV light, suggesting a variety of phenotypes that are well suited to respond to microgravity and radiation. Genomic analyses also indicated that the extracellular region, outer membrane, and cell wall were among the highest cellular component results, thus implying a set of genes associated with Titan-like cell plasticity. Finally, the highest molecular function matches included cytoskeletal motor activity, microtubule motor activity, and nuclear export signal receptor activity.
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spelling pubmed-88753962022-02-26 Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station Bijlani, Swati Parker, Ceth Singh, Nitin K. Sierra, Maria A. Foox, Jonathan Wang, Clay C. C. Mason, Christopher E. Venkateswaran, Kasthuri J Fungi (Basel) Article Multiple strains of a novel yeast belonging to genus Naganishia were isolated from environmental surfaces aboard the International Space Station (ISS). These strains exhibited a phenotype similar to Titan cell (~10 µm diameter) morphology when grown under a combination of simulated microgravity and 5% CO(2) conditions. Confocal, scanning, and transmission electron microscopy revealed distinct morphological differences between the microgravity-grown cells and the standard Earth gravity-grown cells, including larger cells and thicker cell walls, altered intracellular morphology, modifications to extracellular fimbriae, budding, and the shedding of bud scars. Phylogenetic analyses via multi-locus sequence typing indicated that these ISS strains represented a single species in the genus Naganishia and were clustered with Naganishia diffluens. The name Naganishia tulchinskyi is proposed to accommodate these strains, with IF6SW-B1(T) as the holotype. The gene ontologies were assigned to the cell morphogenesis, microtubule-based response, and response to UV light, suggesting a variety of phenotypes that are well suited to respond to microgravity and radiation. Genomic analyses also indicated that the extracellular region, outer membrane, and cell wall were among the highest cellular component results, thus implying a set of genes associated with Titan-like cell plasticity. Finally, the highest molecular function matches included cytoskeletal motor activity, microtubule motor activity, and nuclear export signal receptor activity. MDPI 2022-02-08 /pmc/articles/PMC8875396/ /pubmed/35205919 http://dx.doi.org/10.3390/jof8020165 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bijlani, Swati
Parker, Ceth
Singh, Nitin K.
Sierra, Maria A.
Foox, Jonathan
Wang, Clay C. C.
Mason, Christopher E.
Venkateswaran, Kasthuri
Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station
title Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station
title_full Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station
title_fullStr Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station
title_full_unstemmed Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station
title_short Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station
title_sort genomic characterization of the titan-like cell producing naganishia tulchinskyi, the first novel eukaryote isolated from the international space station
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8875396/
https://www.ncbi.nlm.nih.gov/pubmed/35205919
http://dx.doi.org/10.3390/jof8020165
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