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Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs †
An important factor for the development of spinal degeneration, pain and the outcome of spinal surgery is known to be the balance of the spine. It must be analyzed in an upright, standing position to ensure physiological loading conditions and visualize load-dependent deformations. Despite the compl...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8879677/ https://www.ncbi.nlm.nih.gov/pubmed/35202204 http://dx.doi.org/10.3390/tomography8010039 |
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author | Bayat, Amirhossein Pace, Danielle F. Sekuboyina, Anjany Payer, Christian Stern, Darko Urschler, Martin Kirschke, Jan S. Menze, Bjoern H. |
author_facet | Bayat, Amirhossein Pace, Danielle F. Sekuboyina, Anjany Payer, Christian Stern, Darko Urschler, Martin Kirschke, Jan S. Menze, Bjoern H. |
author_sort | Bayat, Amirhossein |
collection | PubMed |
description | An important factor for the development of spinal degeneration, pain and the outcome of spinal surgery is known to be the balance of the spine. It must be analyzed in an upright, standing position to ensure physiological loading conditions and visualize load-dependent deformations. Despite the complex 3D shape of the spine, this analysis is currently performed using 2D radiographs, as all frequently used 3D imaging techniques require the patient to be scanned in a prone position. To overcome this limitation, we propose a deep neural network to reconstruct the 3D spinal pose in an upright standing position, loaded naturally. Specifically, we propose a novel neural network architecture, which takes orthogonal 2D radiographs and infers the spine’s 3D posture using vertebral shape priors. In this work, we define vertebral shape priors using an atlas and a spine shape prior, incorporating both into our proposed network architecture. We validate our architecture on digitally reconstructed radiographs, achieving a 3D reconstruction Dice of [Formula: see text] , indicating an almost perfect 2D-to-3D domain translation. Validating the reconstruction accuracy of a 3D standing spine on real data is infeasible due to the lack of a valid ground truth. Hence, we design a novel experiment for this purpose, using an orientation invariant distance metric, to evaluate our model’s ability to synthesize full-3D, upright, and patient-specific spine models. We compare the synthesized spine shapes from clinical upright standing radiographs to the same patient’s 3D spinal posture in the prone position from CT. |
format | Online Article Text |
id | pubmed-8879677 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-88796772022-02-26 Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs † Bayat, Amirhossein Pace, Danielle F. Sekuboyina, Anjany Payer, Christian Stern, Darko Urschler, Martin Kirschke, Jan S. Menze, Bjoern H. Tomography Article An important factor for the development of spinal degeneration, pain and the outcome of spinal surgery is known to be the balance of the spine. It must be analyzed in an upright, standing position to ensure physiological loading conditions and visualize load-dependent deformations. Despite the complex 3D shape of the spine, this analysis is currently performed using 2D radiographs, as all frequently used 3D imaging techniques require the patient to be scanned in a prone position. To overcome this limitation, we propose a deep neural network to reconstruct the 3D spinal pose in an upright standing position, loaded naturally. Specifically, we propose a novel neural network architecture, which takes orthogonal 2D radiographs and infers the spine’s 3D posture using vertebral shape priors. In this work, we define vertebral shape priors using an atlas and a spine shape prior, incorporating both into our proposed network architecture. We validate our architecture on digitally reconstructed radiographs, achieving a 3D reconstruction Dice of [Formula: see text] , indicating an almost perfect 2D-to-3D domain translation. Validating the reconstruction accuracy of a 3D standing spine on real data is infeasible due to the lack of a valid ground truth. Hence, we design a novel experiment for this purpose, using an orientation invariant distance metric, to evaluate our model’s ability to synthesize full-3D, upright, and patient-specific spine models. We compare the synthesized spine shapes from clinical upright standing radiographs to the same patient’s 3D spinal posture in the prone position from CT. MDPI 2022-02-11 /pmc/articles/PMC8879677/ /pubmed/35202204 http://dx.doi.org/10.3390/tomography8010039 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Bayat, Amirhossein Pace, Danielle F. Sekuboyina, Anjany Payer, Christian Stern, Darko Urschler, Martin Kirschke, Jan S. Menze, Bjoern H. Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs † |
title | Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs † |
title_full | Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs † |
title_fullStr | Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs † |
title_full_unstemmed | Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs † |
title_short | Anatomy-Aware Inference of the 3D Standing Spine Posture from 2D Radiographs † |
title_sort | anatomy-aware inference of the 3d standing spine posture from 2d radiographs † |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8879677/ https://www.ncbi.nlm.nih.gov/pubmed/35202204 http://dx.doi.org/10.3390/tomography8010039 |
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