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Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models

The lumbar spine plays a very important role in our load transfer and mobility. Vertebrae localization and segmentation are useful in detecting spinal deformities and fractures. Understanding of automated medical imagery is of main importance to help doctors in handling the time-consuming manual or...

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Autores principales: Mushtaq, Malaika, Akram, Muhammad Usman, Alghamdi, Norah Saleh, Fatima, Joddat, Masood, Rao Farhat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8879729/
https://www.ncbi.nlm.nih.gov/pubmed/35214448
http://dx.doi.org/10.3390/s22041547
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author Mushtaq, Malaika
Akram, Muhammad Usman
Alghamdi, Norah Saleh
Fatima, Joddat
Masood, Rao Farhat
author_facet Mushtaq, Malaika
Akram, Muhammad Usman
Alghamdi, Norah Saleh
Fatima, Joddat
Masood, Rao Farhat
author_sort Mushtaq, Malaika
collection PubMed
description The lumbar spine plays a very important role in our load transfer and mobility. Vertebrae localization and segmentation are useful in detecting spinal deformities and fractures. Understanding of automated medical imagery is of main importance to help doctors in handling the time-consuming manual or semi-manual diagnosis. Our paper presents the methods that will help clinicians to grade the severity of the disease with confidence, as the current manual diagnosis by different doctors has dissimilarity and variations in the analysis of diseases. In this paper we discuss the lumbar spine localization and segmentation which help for the analysis of lumbar spine deformities. The lumber spine is localized using YOLOv5 which is the fifth variant of the YOLO family. It is the fastest and the lightest object detector. Mean average precision (mAP) of 0.975 is achieved by YOLOv5. To diagnose the lumbar lordosis, we correlated the angles with region area that is computed from the YOLOv5 centroids and obtained 74.5% accuracy. Cropped images from YOLOv5 bounding boxes are passed through HED U-Net, which is a combination of segmentation and edge detection frameworks, to obtain the segmented vertebrae and its edges. Lumbar lordortic angles (LLAs) and lumbosacral angles (LSAs) are found after detecting the corners of vertebrae using a Harris corner detector with very small mean errors of 0.29° and 0.38°, respectively. This paper compares the different object detectors used to localize the vertebrae, the results of two methods used to diagnose the lumbar deformity, and the results with other researchers.
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spelling pubmed-88797292022-02-26 Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models Mushtaq, Malaika Akram, Muhammad Usman Alghamdi, Norah Saleh Fatima, Joddat Masood, Rao Farhat Sensors (Basel) Article The lumbar spine plays a very important role in our load transfer and mobility. Vertebrae localization and segmentation are useful in detecting spinal deformities and fractures. Understanding of automated medical imagery is of main importance to help doctors in handling the time-consuming manual or semi-manual diagnosis. Our paper presents the methods that will help clinicians to grade the severity of the disease with confidence, as the current manual diagnosis by different doctors has dissimilarity and variations in the analysis of diseases. In this paper we discuss the lumbar spine localization and segmentation which help for the analysis of lumbar spine deformities. The lumber spine is localized using YOLOv5 which is the fifth variant of the YOLO family. It is the fastest and the lightest object detector. Mean average precision (mAP) of 0.975 is achieved by YOLOv5. To diagnose the lumbar lordosis, we correlated the angles with region area that is computed from the YOLOv5 centroids and obtained 74.5% accuracy. Cropped images from YOLOv5 bounding boxes are passed through HED U-Net, which is a combination of segmentation and edge detection frameworks, to obtain the segmented vertebrae and its edges. Lumbar lordortic angles (LLAs) and lumbosacral angles (LSAs) are found after detecting the corners of vertebrae using a Harris corner detector with very small mean errors of 0.29° and 0.38°, respectively. This paper compares the different object detectors used to localize the vertebrae, the results of two methods used to diagnose the lumbar deformity, and the results with other researchers. MDPI 2022-02-17 /pmc/articles/PMC8879729/ /pubmed/35214448 http://dx.doi.org/10.3390/s22041547 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mushtaq, Malaika
Akram, Muhammad Usman
Alghamdi, Norah Saleh
Fatima, Joddat
Masood, Rao Farhat
Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models
title Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models
title_full Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models
title_fullStr Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models
title_full_unstemmed Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models
title_short Localization and Edge-Based Segmentation of Lumbar Spine Vertebrae to Identify the Deformities Using Deep Learning Models
title_sort localization and edge-based segmentation of lumbar spine vertebrae to identify the deformities using deep learning models
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8879729/
https://www.ncbi.nlm.nih.gov/pubmed/35214448
http://dx.doi.org/10.3390/s22041547
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