Cargando…
gmxapi: A GROMACS-native Python interface for molecular dynamics with ensemble and plugin support
Gmxapi provides an integrated, native Python API for both standard and advanced molecular dynamics simulations in GROMACS. The Python interface permits multiple levels of integration with the core GROMACS libraries, and legacy support is provided via an interface that mimics the command-line syntax,...
Autores principales: | Irrgang, M. Eric, Davis, Caroline, Kasson, Peter M. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8880871/ https://www.ncbi.nlm.nih.gov/pubmed/35157693 http://dx.doi.org/10.1371/journal.pcbi.1009835 |
Ejemplares similares
-
Improvements in GROMACS plugin for PyMOL including implicit solvent simulations and displaying results of PCA analysis
por: Makarewicz, Tomasz, et al.
Publicado: (2016) -
Scalable Constant pH Molecular Dynamics in GROMACS
por: Aho, Noora, et al.
Publicado: (2022) -
Gromita: A Fully Integrated Graphical User Interface to Gromacs 4
por: Sellis, Diamantis, et al.
Publicado: (2009) -
Visual dynamics: a WEB application for molecular dynamics simulation using GROMACS
por: Vieira, Ivo Henrique Provensi, et al.
Publicado: (2023) -
CHAPERONg: A tool for automated GROMACS-based molecular dynamics simulations and trajectory analyses
por: Yekeen, Abeeb Abiodun, et al.
Publicado: (2023)