Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii

Comparison of the Dendrosicyos socotranus and Corallocarpus boehmii (tribe Coniandreae, family Cucurbitaceae) plastome data was of interest. Data on RNA, tRNA, GC%, plastome size, CDS and pseudogene were tabulated for the two species. The total length of 1,57,380 bp and 1,58,744 bp which includes LS...

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Detalles Bibliográficos
Autores principales: Ali, Mohammad Ajmal, Al-Anazi, Khalid Mashay, Al-Hemaid, Fahad, Ansari, Waquar Akhtar, Lee, Joongku
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2021
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8882076/
https://www.ncbi.nlm.nih.gov/pubmed/35283585
http://dx.doi.org/10.6026/97320630017662
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author Ali, Mohammad Ajmal
Al-Anazi, Khalid Mashay
Al-Hemaid, Fahad
Ansari, Waquar Akhtar
Lee, Joongku
author_facet Ali, Mohammad Ajmal
Al-Anazi, Khalid Mashay
Al-Hemaid, Fahad
Ansari, Waquar Akhtar
Lee, Joongku
author_sort Ali, Mohammad Ajmal
collection PubMed
description Comparison of the Dendrosicyos socotranus and Corallocarpus boehmii (tribe Coniandreae, family Cucurbitaceae) plastome data was of interest. Data on RNA, tRNA, GC%, plastome size, CDS and pseudogene were tabulated for the two species. The total length of 1,57,380 bp and 1,58,744 bp which includes LSC, SSC, IRa, and IRb, while their GC content was 37.1% and 37% respectively. The variation in the length of genes e.g. ndhD, ndhI, rpl22, rpoC2, rps16, rps19, rps8, ycf1and ycf2 noted. Data help to document the genetic differences between usual (climber) with those of tree cucurbits.
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spelling pubmed-88820762022-03-10 Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii Ali, Mohammad Ajmal Al-Anazi, Khalid Mashay Al-Hemaid, Fahad Ansari, Waquar Akhtar Lee, Joongku Bioinformation Research Article Comparison of the Dendrosicyos socotranus and Corallocarpus boehmii (tribe Coniandreae, family Cucurbitaceae) plastome data was of interest. Data on RNA, tRNA, GC%, plastome size, CDS and pseudogene were tabulated for the two species. The total length of 1,57,380 bp and 1,58,744 bp which includes LSC, SSC, IRa, and IRb, while their GC content was 37.1% and 37% respectively. The variation in the length of genes e.g. ndhD, ndhI, rpl22, rpoC2, rps16, rps19, rps8, ycf1and ycf2 noted. Data help to document the genetic differences between usual (climber) with those of tree cucurbits. Biomedical Informatics 2021-07-31 /pmc/articles/PMC8882076/ /pubmed/35283585 http://dx.doi.org/10.6026/97320630017662 Text en © 2021 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
spellingShingle Research Article
Ali, Mohammad Ajmal
Al-Anazi, Khalid Mashay
Al-Hemaid, Fahad
Ansari, Waquar Akhtar
Lee, Joongku
Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii
title Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii
title_full Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii
title_fullStr Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii
title_full_unstemmed Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii
title_short Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii
title_sort comparative plastome data analysis of dendrosicyos socotranus and corallocarpus boehmii
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8882076/
https://www.ncbi.nlm.nih.gov/pubmed/35283585
http://dx.doi.org/10.6026/97320630017662
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