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Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma

BACKGROUND: Long non-coding RNA (lncRNA) plays an essential regulatory role in the occurrence and development of hepatocellular carcinoma (HCC). This paper aims to establish an immune-related lncRNA (irlncRNA) pairs model independent of expression level for risk assessment and prognosis prediction o...

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Autores principales: Zhu, Yinghui, Shan, Dezhi, Guo, Lianyi, Chen, Shujia, Li, Xiaofei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8882675/
https://www.ncbi.nlm.nih.gov/pubmed/35237066
http://dx.doi.org/10.2147/IJGM.S343350
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author Zhu, Yinghui
Shan, Dezhi
Guo, Lianyi
Chen, Shujia
Li, Xiaofei
author_facet Zhu, Yinghui
Shan, Dezhi
Guo, Lianyi
Chen, Shujia
Li, Xiaofei
author_sort Zhu, Yinghui
collection PubMed
description BACKGROUND: Long non-coding RNA (lncRNA) plays an essential regulatory role in the occurrence and development of hepatocellular carcinoma (HCC). This paper aims to establish an immune-related lncRNA (irlncRNA) pairs model independent of expression level for risk assessment and prognosis prediction of HCC. METHODS: Transcriptome data and corresponding clinical data were downloaded from TCGA. HCC patients were randomly divided into training group and test group. Univariate Cox regression analysis, LASSO regression analysis, and stepwise multiple Cox regression analysis were used to establish a prognostic model. The prediction ability of the model was verified by ROC curves. Next, the patients were divided into low-risk and high-risk groups. We compared the differences between the two groups in survival rate, clinicopathological characteristics, tumor immune cell infiltration status, chemotherapeutic drug sensitivity and immunosuppressive molecules. RESULTS: A prognosis prediction model was established based on 7 irlncRNA pairs, namely irlncRNA pairs (IRLP). ROC curves of the training group and test group showed that the IRLP model had high sensitivity and specificity for survival prediction. Kaplan–Meier analysis showed that the survival rate of the high-risk group was significantly lower than that of the low-risk group. Immune cell infiltration analysis showed that the high-risk group was significantly correlated with various immune cell infiltration. Finally, there were statistically significant differences in chemosensitivity and molecular marker expression between the two groups. CONCLUSION: The prognosis prediction model established by irlncRNA pairs has a certain guiding significance for the prognosis prediction of HCC. It may provide valuable clinical applications in antitumor immunotherapy.
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spelling pubmed-88826752022-03-01 Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma Zhu, Yinghui Shan, Dezhi Guo, Lianyi Chen, Shujia Li, Xiaofei Int J Gen Med Original Research BACKGROUND: Long non-coding RNA (lncRNA) plays an essential regulatory role in the occurrence and development of hepatocellular carcinoma (HCC). This paper aims to establish an immune-related lncRNA (irlncRNA) pairs model independent of expression level for risk assessment and prognosis prediction of HCC. METHODS: Transcriptome data and corresponding clinical data were downloaded from TCGA. HCC patients were randomly divided into training group and test group. Univariate Cox regression analysis, LASSO regression analysis, and stepwise multiple Cox regression analysis were used to establish a prognostic model. The prediction ability of the model was verified by ROC curves. Next, the patients were divided into low-risk and high-risk groups. We compared the differences between the two groups in survival rate, clinicopathological characteristics, tumor immune cell infiltration status, chemotherapeutic drug sensitivity and immunosuppressive molecules. RESULTS: A prognosis prediction model was established based on 7 irlncRNA pairs, namely irlncRNA pairs (IRLP). ROC curves of the training group and test group showed that the IRLP model had high sensitivity and specificity for survival prediction. Kaplan–Meier analysis showed that the survival rate of the high-risk group was significantly lower than that of the low-risk group. Immune cell infiltration analysis showed that the high-risk group was significantly correlated with various immune cell infiltration. Finally, there were statistically significant differences in chemosensitivity and molecular marker expression between the two groups. CONCLUSION: The prognosis prediction model established by irlncRNA pairs has a certain guiding significance for the prognosis prediction of HCC. It may provide valuable clinical applications in antitumor immunotherapy. Dove 2022-02-22 /pmc/articles/PMC8882675/ /pubmed/35237066 http://dx.doi.org/10.2147/IJGM.S343350 Text en © 2022 Zhu et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Zhu, Yinghui
Shan, Dezhi
Guo, Lianyi
Chen, Shujia
Li, Xiaofei
Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma
title Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma
title_full Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma
title_fullStr Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma
title_full_unstemmed Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma
title_short Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma
title_sort immune-related lncrna pairs clinical prognosis model construction for hepatocellular carcinoma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8882675/
https://www.ncbi.nlm.nih.gov/pubmed/35237066
http://dx.doi.org/10.2147/IJGM.S343350
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