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Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data
The goal of the present study was to assess the predictive performance of a minimal generic rat physiologically based kinetic (PBK) model based on in vitro and in silico input data to predict peak plasma concentrations (C(max)) upon single oral dosing. To this purpose, a dataset was generated of 396...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8883350/ https://www.ncbi.nlm.nih.gov/pubmed/34927682 http://dx.doi.org/10.1093/toxsci/kfab150 |
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author | Punt, Ans Louisse, Jochem Pinckaers, Nicole Fabian, Eric van Ravenzwaay, Bennard |
author_facet | Punt, Ans Louisse, Jochem Pinckaers, Nicole Fabian, Eric van Ravenzwaay, Bennard |
author_sort | Punt, Ans |
collection | PubMed |
description | The goal of the present study was to assess the predictive performance of a minimal generic rat physiologically based kinetic (PBK) model based on in vitro and in silico input data to predict peak plasma concentrations (C(max)) upon single oral dosing. To this purpose, a dataset was generated of 3960 C(max) predictions for 44 compounds, applying different combinations of in vitro and in silico approaches for chemical parameterization, and comparison of the predictions to reported in vivo data. Best performance was obtained when (1) the hepatic clearance was parameterized based on in vitro measured intrinsic clearance values, (2) the method of Rodgers and Rowland for calculating partition coefficients, and (3) in silico calculated fraction unbound plasma and P(app) values (the latter especially for very lipophilic compounds). Based on these input data, the median C(max) of 32 compounds could be predicted within 10-fold of the observed C(max), with 22 out of these 32 compounds being predicted within 5-fold, and 8 compounds within 2-fold. Overestimations of more than 10-fold were observed for 12 compounds, whereas no underestimations of more than 10-fold occurred. Median C(max) predictions were frequently found to be within 10-fold of the observed C(max) when the scaled unbound hepatic intrinsic clearance (Cl(int,u)) was either higher than 20 l/h or lower than 1 l/h. Similar findings were obtained with a test set of 5 in-house BASF compounds. Overall, this study provides relevant insights in the predictive performance of a minimal PBK model based on in vitro and in silico input data. |
format | Online Article Text |
id | pubmed-8883350 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-88833502022-02-28 Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data Punt, Ans Louisse, Jochem Pinckaers, Nicole Fabian, Eric van Ravenzwaay, Bennard Toxicol Sci Biotransformation, Toxicokinetics, and Pharmacokinetics The goal of the present study was to assess the predictive performance of a minimal generic rat physiologically based kinetic (PBK) model based on in vitro and in silico input data to predict peak plasma concentrations (C(max)) upon single oral dosing. To this purpose, a dataset was generated of 3960 C(max) predictions for 44 compounds, applying different combinations of in vitro and in silico approaches for chemical parameterization, and comparison of the predictions to reported in vivo data. Best performance was obtained when (1) the hepatic clearance was parameterized based on in vitro measured intrinsic clearance values, (2) the method of Rodgers and Rowland for calculating partition coefficients, and (3) in silico calculated fraction unbound plasma and P(app) values (the latter especially for very lipophilic compounds). Based on these input data, the median C(max) of 32 compounds could be predicted within 10-fold of the observed C(max), with 22 out of these 32 compounds being predicted within 5-fold, and 8 compounds within 2-fold. Overestimations of more than 10-fold were observed for 12 compounds, whereas no underestimations of more than 10-fold occurred. Median C(max) predictions were frequently found to be within 10-fold of the observed C(max) when the scaled unbound hepatic intrinsic clearance (Cl(int,u)) was either higher than 20 l/h or lower than 1 l/h. Similar findings were obtained with a test set of 5 in-house BASF compounds. Overall, this study provides relevant insights in the predictive performance of a minimal PBK model based on in vitro and in silico input data. Oxford University Press 2021-12-20 /pmc/articles/PMC8883350/ /pubmed/34927682 http://dx.doi.org/10.1093/toxsci/kfab150 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Society of Toxicology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Biotransformation, Toxicokinetics, and Pharmacokinetics Punt, Ans Louisse, Jochem Pinckaers, Nicole Fabian, Eric van Ravenzwaay, Bennard Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data |
title | Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data |
title_full | Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data |
title_fullStr | Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data |
title_full_unstemmed | Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data |
title_short | Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data |
title_sort | predictive performance of next generation physiologically based kinetic (pbk) model predictions in rats based on in vitro and in silico input data |
topic | Biotransformation, Toxicokinetics, and Pharmacokinetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8883350/ https://www.ncbi.nlm.nih.gov/pubmed/34927682 http://dx.doi.org/10.1093/toxsci/kfab150 |
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