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Systems approaches to investigate the role of NF-κB signaling in aging

The nuclear factor-κB (NF-κB) signaling pathway is one of the most well-studied pathways related to inflammation, and its involvement in aging has attracted considerable attention. As aging is a complex phenomenon and is the result of a multi-step process, the involvement of the NF-κB pathway in agi...

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Autores principales: Haga, Masatoshi, Okada, Mariko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8883486/
https://www.ncbi.nlm.nih.gov/pubmed/35098992
http://dx.doi.org/10.1042/BCJ20210547
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author Haga, Masatoshi
Okada, Mariko
author_facet Haga, Masatoshi
Okada, Mariko
author_sort Haga, Masatoshi
collection PubMed
description The nuclear factor-κB (NF-κB) signaling pathway is one of the most well-studied pathways related to inflammation, and its involvement in aging has attracted considerable attention. As aging is a complex phenomenon and is the result of a multi-step process, the involvement of the NF-κB pathway in aging remains unclear. To elucidate the role of NF-κB in the regulation of aging, different systems biology approaches have been employed. A multi-omics data-driven approach can be used to interpret and clarify unknown mechanisms but cannot generate mechanistic regulatory structures alone. In contrast, combining this approach with a mathematical modeling approach can identify the mechanistics of the phenomena of interest. The development of single-cell technologies has also helped clarify the heterogeneity of the NF-κB response and underlying mechanisms. Here, we review advances in the understanding of the regulation of aging by NF-κB by focusing on omics approaches, single-cell analysis, and mathematical modeling of the NF-κB network.
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spelling pubmed-88834862022-03-10 Systems approaches to investigate the role of NF-κB signaling in aging Haga, Masatoshi Okada, Mariko Biochem J Systems Biology & Networks The nuclear factor-κB (NF-κB) signaling pathway is one of the most well-studied pathways related to inflammation, and its involvement in aging has attracted considerable attention. As aging is a complex phenomenon and is the result of a multi-step process, the involvement of the NF-κB pathway in aging remains unclear. To elucidate the role of NF-κB in the regulation of aging, different systems biology approaches have been employed. A multi-omics data-driven approach can be used to interpret and clarify unknown mechanisms but cannot generate mechanistic regulatory structures alone. In contrast, combining this approach with a mathematical modeling approach can identify the mechanistics of the phenomena of interest. The development of single-cell technologies has also helped clarify the heterogeneity of the NF-κB response and underlying mechanisms. Here, we review advances in the understanding of the regulation of aging by NF-κB by focusing on omics approaches, single-cell analysis, and mathematical modeling of the NF-κB network. Portland Press Ltd. 2022-01-28 2022-01-28 /pmc/articles/PMC8883486/ /pubmed/35098992 http://dx.doi.org/10.1042/BCJ20210547 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Systems Biology & Networks
Haga, Masatoshi
Okada, Mariko
Systems approaches to investigate the role of NF-κB signaling in aging
title Systems approaches to investigate the role of NF-κB signaling in aging
title_full Systems approaches to investigate the role of NF-κB signaling in aging
title_fullStr Systems approaches to investigate the role of NF-κB signaling in aging
title_full_unstemmed Systems approaches to investigate the role of NF-κB signaling in aging
title_short Systems approaches to investigate the role of NF-κB signaling in aging
title_sort systems approaches to investigate the role of nf-κb signaling in aging
topic Systems Biology & Networks
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8883486/
https://www.ncbi.nlm.nih.gov/pubmed/35098992
http://dx.doi.org/10.1042/BCJ20210547
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