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Systems approaches to investigate the role of NF-κB signaling in aging
The nuclear factor-κB (NF-κB) signaling pathway is one of the most well-studied pathways related to inflammation, and its involvement in aging has attracted considerable attention. As aging is a complex phenomenon and is the result of a multi-step process, the involvement of the NF-κB pathway in agi...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8883486/ https://www.ncbi.nlm.nih.gov/pubmed/35098992 http://dx.doi.org/10.1042/BCJ20210547 |
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author | Haga, Masatoshi Okada, Mariko |
author_facet | Haga, Masatoshi Okada, Mariko |
author_sort | Haga, Masatoshi |
collection | PubMed |
description | The nuclear factor-κB (NF-κB) signaling pathway is one of the most well-studied pathways related to inflammation, and its involvement in aging has attracted considerable attention. As aging is a complex phenomenon and is the result of a multi-step process, the involvement of the NF-κB pathway in aging remains unclear. To elucidate the role of NF-κB in the regulation of aging, different systems biology approaches have been employed. A multi-omics data-driven approach can be used to interpret and clarify unknown mechanisms but cannot generate mechanistic regulatory structures alone. In contrast, combining this approach with a mathematical modeling approach can identify the mechanistics of the phenomena of interest. The development of single-cell technologies has also helped clarify the heterogeneity of the NF-κB response and underlying mechanisms. Here, we review advances in the understanding of the regulation of aging by NF-κB by focusing on omics approaches, single-cell analysis, and mathematical modeling of the NF-κB network. |
format | Online Article Text |
id | pubmed-8883486 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88834862022-03-10 Systems approaches to investigate the role of NF-κB signaling in aging Haga, Masatoshi Okada, Mariko Biochem J Systems Biology & Networks The nuclear factor-κB (NF-κB) signaling pathway is one of the most well-studied pathways related to inflammation, and its involvement in aging has attracted considerable attention. As aging is a complex phenomenon and is the result of a multi-step process, the involvement of the NF-κB pathway in aging remains unclear. To elucidate the role of NF-κB in the regulation of aging, different systems biology approaches have been employed. A multi-omics data-driven approach can be used to interpret and clarify unknown mechanisms but cannot generate mechanistic regulatory structures alone. In contrast, combining this approach with a mathematical modeling approach can identify the mechanistics of the phenomena of interest. The development of single-cell technologies has also helped clarify the heterogeneity of the NF-κB response and underlying mechanisms. Here, we review advances in the understanding of the regulation of aging by NF-κB by focusing on omics approaches, single-cell analysis, and mathematical modeling of the NF-κB network. Portland Press Ltd. 2022-01-28 2022-01-28 /pmc/articles/PMC8883486/ /pubmed/35098992 http://dx.doi.org/10.1042/BCJ20210547 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Systems Biology & Networks Haga, Masatoshi Okada, Mariko Systems approaches to investigate the role of NF-κB signaling in aging |
title | Systems approaches to investigate the role of NF-κB signaling in aging |
title_full | Systems approaches to investigate the role of NF-κB signaling in aging |
title_fullStr | Systems approaches to investigate the role of NF-κB signaling in aging |
title_full_unstemmed | Systems approaches to investigate the role of NF-κB signaling in aging |
title_short | Systems approaches to investigate the role of NF-κB signaling in aging |
title_sort | systems approaches to investigate the role of nf-κb signaling in aging |
topic | Systems Biology & Networks |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8883486/ https://www.ncbi.nlm.nih.gov/pubmed/35098992 http://dx.doi.org/10.1042/BCJ20210547 |
work_keys_str_mv | AT hagamasatoshi systemsapproachestoinvestigatetheroleofnfkbsignalinginaging AT okadamariko systemsapproachestoinvestigatetheroleofnfkbsignalinginaging |