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A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma
PURPOSE: Pyroptosis has vital roles in tumorigenesis and cancer development; however, its relationship with cervical squamous cell cancer (CSCC) remains unexplored. In this study, we aimed to develop a CSCC prediction signature related to pyroptosis. PATIENTS AND METHODS: Consensus clustering analys...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8885126/ https://www.ncbi.nlm.nih.gov/pubmed/35237069 http://dx.doi.org/10.2147/IJGM.S353576 |
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author | Ou, Tingyu Wei, Yousheng Long, Ying Pan, Xinbin Yao, Desheng |
author_facet | Ou, Tingyu Wei, Yousheng Long, Ying Pan, Xinbin Yao, Desheng |
author_sort | Ou, Tingyu |
collection | PubMed |
description | PURPOSE: Pyroptosis has vital roles in tumorigenesis and cancer development; however, its relationship with cervical squamous cell cancer (CSCC) remains unexplored. In this study, we aimed to develop a CSCC prediction signature related to pyroptosis. PATIENTS AND METHODS: Consensus clustering analysis was conducted to detect pyroptosis-related subclusters for CSCC. Next, differentially expressed genes (DEGs) between subclusters were identified. Univariate, least absolute shrinkage and selection operator, and stepwise multivariate Cox regression analyses were applied to establish a prognostic model and a nomogram drawn. Additionally, functional enrichment analysis, tumor mutation burden, and immune characteristics associated with this signature were investigated. RESULTS: We constructed a seven-gene signature that functions as an independent predictor of prognosis in CSCC using data from The Cancer Genome Atlas. Patients with CSCC were divided into two groups based on median risk score, and patients in the low-risk group had significantly longer survival time than those in the high-risk group. Our findings were validated using Gene Expression Omnibus cohort data. We also established a nomogram, to expand the clinical applicability of our findings. The seven gene signature was associated with various molecular pathways, tumor mutation status, and immune microenvironment. CONCLUSION: The pyroptosis-related risk signature consisting of seven genes developed here represents a potential robust biomarker for predicting prognosis and immunotherapy response in patients with CSCC. |
format | Online Article Text |
id | pubmed-8885126 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-88851262022-03-01 A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma Ou, Tingyu Wei, Yousheng Long, Ying Pan, Xinbin Yao, Desheng Int J Gen Med Original Research PURPOSE: Pyroptosis has vital roles in tumorigenesis and cancer development; however, its relationship with cervical squamous cell cancer (CSCC) remains unexplored. In this study, we aimed to develop a CSCC prediction signature related to pyroptosis. PATIENTS AND METHODS: Consensus clustering analysis was conducted to detect pyroptosis-related subclusters for CSCC. Next, differentially expressed genes (DEGs) between subclusters were identified. Univariate, least absolute shrinkage and selection operator, and stepwise multivariate Cox regression analyses were applied to establish a prognostic model and a nomogram drawn. Additionally, functional enrichment analysis, tumor mutation burden, and immune characteristics associated with this signature were investigated. RESULTS: We constructed a seven-gene signature that functions as an independent predictor of prognosis in CSCC using data from The Cancer Genome Atlas. Patients with CSCC were divided into two groups based on median risk score, and patients in the low-risk group had significantly longer survival time than those in the high-risk group. Our findings were validated using Gene Expression Omnibus cohort data. We also established a nomogram, to expand the clinical applicability of our findings. The seven gene signature was associated with various molecular pathways, tumor mutation status, and immune microenvironment. CONCLUSION: The pyroptosis-related risk signature consisting of seven genes developed here represents a potential robust biomarker for predicting prognosis and immunotherapy response in patients with CSCC. Dove 2022-02-24 /pmc/articles/PMC8885126/ /pubmed/35237069 http://dx.doi.org/10.2147/IJGM.S353576 Text en © 2022 Ou et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Ou, Tingyu Wei, Yousheng Long, Ying Pan, Xinbin Yao, Desheng A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma |
title | A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma |
title_full | A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma |
title_fullStr | A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma |
title_full_unstemmed | A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma |
title_short | A Novel Pyroptosis-Related Prognostic Signature for Cervical Squamous Cell Carcinoma |
title_sort | novel pyroptosis-related prognostic signature for cervical squamous cell carcinoma |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8885126/ https://www.ncbi.nlm.nih.gov/pubmed/35237069 http://dx.doi.org/10.2147/IJGM.S353576 |
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