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Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds

Although the mode of action of the ribosomes, the multi-component universal effective protein-synthesis organelles, has been thoroughly explored, their mere appearance remained elusive. Our earlier comparative structural studies suggested that a universal internal small RNA pocket-like segment calle...

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Autores principales: Bose, Tanaya, Fridkin, Gil, Davidovich, Chen, Krupkin, Miri, Dinger, Nikita, Falkovich, Alla H, Peleg, Yoav, Agmon, Ilana, Bashan, Anat, Yonath, Ada
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8886871/
https://www.ncbi.nlm.nih.gov/pubmed/35137169
http://dx.doi.org/10.1093/nar/gkac052
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author Bose, Tanaya
Fridkin, Gil
Davidovich, Chen
Krupkin, Miri
Dinger, Nikita
Falkovich, Alla H
Peleg, Yoav
Agmon, Ilana
Bashan, Anat
Yonath, Ada
author_facet Bose, Tanaya
Fridkin, Gil
Davidovich, Chen
Krupkin, Miri
Dinger, Nikita
Falkovich, Alla H
Peleg, Yoav
Agmon, Ilana
Bashan, Anat
Yonath, Ada
author_sort Bose, Tanaya
collection PubMed
description Although the mode of action of the ribosomes, the multi-component universal effective protein-synthesis organelles, has been thoroughly explored, their mere appearance remained elusive. Our earlier comparative structural studies suggested that a universal internal small RNA pocket-like segment called by us the protoribosome, which is still embedded in the contemporary ribosome, is a vestige of the primordial ribosome. Herein, after constructing such pockets, we show using the "fragment reaction" and its analyses by MALDI-TOF and LC–MS mass spectrometry techniques, that several protoribosome constructs are indeed capable of mediating peptide-bond formation. These findings present strong evidence supporting our hypothesis on origin of life and on ribosome's construction, thus suggesting that the protoribosome may be the missing link between the RNA dominated world and the contemporary nucleic acids/proteins life.
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spelling pubmed-88868712022-03-02 Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds Bose, Tanaya Fridkin, Gil Davidovich, Chen Krupkin, Miri Dinger, Nikita Falkovich, Alla H Peleg, Yoav Agmon, Ilana Bashan, Anat Yonath, Ada Nucleic Acids Res Chemical Biology and Nucleic Acid Chemistry Although the mode of action of the ribosomes, the multi-component universal effective protein-synthesis organelles, has been thoroughly explored, their mere appearance remained elusive. Our earlier comparative structural studies suggested that a universal internal small RNA pocket-like segment called by us the protoribosome, which is still embedded in the contemporary ribosome, is a vestige of the primordial ribosome. Herein, after constructing such pockets, we show using the "fragment reaction" and its analyses by MALDI-TOF and LC–MS mass spectrometry techniques, that several protoribosome constructs are indeed capable of mediating peptide-bond formation. These findings present strong evidence supporting our hypothesis on origin of life and on ribosome's construction, thus suggesting that the protoribosome may be the missing link between the RNA dominated world and the contemporary nucleic acids/proteins life. Oxford University Press 2022-02-07 /pmc/articles/PMC8886871/ /pubmed/35137169 http://dx.doi.org/10.1093/nar/gkac052 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Chemical Biology and Nucleic Acid Chemistry
Bose, Tanaya
Fridkin, Gil
Davidovich, Chen
Krupkin, Miri
Dinger, Nikita
Falkovich, Alla H
Peleg, Yoav
Agmon, Ilana
Bashan, Anat
Yonath, Ada
Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds
title Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds
title_full Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds
title_fullStr Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds
title_full_unstemmed Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds
title_short Origin of life: protoribosome forms peptide bonds and links RNA and protein dominated worlds
title_sort origin of life: protoribosome forms peptide bonds and links rna and protein dominated worlds
topic Chemical Biology and Nucleic Acid Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8886871/
https://www.ncbi.nlm.nih.gov/pubmed/35137169
http://dx.doi.org/10.1093/nar/gkac052
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