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Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation

Agent-based models (ABMs) have become a common tool for estimating demand for hospital beds during the COVID-19 pandemic. A key parameter in these ABMs is the probability of hospitalization for agents with COVID-19. Many published COVID-19 ABMs use either single point or age-specific estimates of th...

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Autores principales: Hadley, Emily, Rhea, Sarah, Jones, Kasey, Li, Lei, Stoner, Marie, Bobashev, Georgiy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8887758/
https://www.ncbi.nlm.nih.gov/pubmed/35231066
http://dx.doi.org/10.1371/journal.pone.0264704
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author Hadley, Emily
Rhea, Sarah
Jones, Kasey
Li, Lei
Stoner, Marie
Bobashev, Georgiy
author_facet Hadley, Emily
Rhea, Sarah
Jones, Kasey
Li, Lei
Stoner, Marie
Bobashev, Georgiy
author_sort Hadley, Emily
collection PubMed
description Agent-based models (ABMs) have become a common tool for estimating demand for hospital beds during the COVID-19 pandemic. A key parameter in these ABMs is the probability of hospitalization for agents with COVID-19. Many published COVID-19 ABMs use either single point or age-specific estimates of the probability of hospitalization for agents with COVID-19, omitting key factors: comorbidities and testing status (i.e., received vs. did not receive COVID-19 test). These omissions can inhibit interpretability, particularly by stakeholders seeking to use an ABM for transparent decision-making. We introduce a straightforward yet novel application of Bayes’ theorem with inputs from aggregated hospital data to better incorporate these factors in an ABM. We update input parameters for a North Carolina COVID-19 ABM using this approach, demonstrate sensitivity to input data selections, and highlight the enhanced interpretability and accuracy of the method and the predictions. We propose that even in tumultuous scenarios with limited information like the early months of the COVID-19 pandemic, straightforward approaches like this one with discrete, attainable inputs can improve ABMs to better support stakeholders.
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spelling pubmed-88877582022-03-02 Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation Hadley, Emily Rhea, Sarah Jones, Kasey Li, Lei Stoner, Marie Bobashev, Georgiy PLoS One Research Article Agent-based models (ABMs) have become a common tool for estimating demand for hospital beds during the COVID-19 pandemic. A key parameter in these ABMs is the probability of hospitalization for agents with COVID-19. Many published COVID-19 ABMs use either single point or age-specific estimates of the probability of hospitalization for agents with COVID-19, omitting key factors: comorbidities and testing status (i.e., received vs. did not receive COVID-19 test). These omissions can inhibit interpretability, particularly by stakeholders seeking to use an ABM for transparent decision-making. We introduce a straightforward yet novel application of Bayes’ theorem with inputs from aggregated hospital data to better incorporate these factors in an ABM. We update input parameters for a North Carolina COVID-19 ABM using this approach, demonstrate sensitivity to input data selections, and highlight the enhanced interpretability and accuracy of the method and the predictions. We propose that even in tumultuous scenarios with limited information like the early months of the COVID-19 pandemic, straightforward approaches like this one with discrete, attainable inputs can improve ABMs to better support stakeholders. Public Library of Science 2022-03-01 /pmc/articles/PMC8887758/ /pubmed/35231066 http://dx.doi.org/10.1371/journal.pone.0264704 Text en © 2022 Hadley et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Hadley, Emily
Rhea, Sarah
Jones, Kasey
Li, Lei
Stoner, Marie
Bobashev, Georgiy
Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation
title Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation
title_full Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation
title_fullStr Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation
title_full_unstemmed Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation
title_short Enhancing the prediction of hospitalization from a COVID-19 agent-based model: A Bayesian method for model parameter estimation
title_sort enhancing the prediction of hospitalization from a covid-19 agent-based model: a bayesian method for model parameter estimation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8887758/
https://www.ncbi.nlm.nih.gov/pubmed/35231066
http://dx.doi.org/10.1371/journal.pone.0264704
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