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Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients

COPD is the fourth leading cause of mortality, and is predicted to be the third leading cause of death worldwide by 2020. But few studies on Tibetan COPD of China. This study identifies distinctive miRNA signatures in Tibetan COPD patients from Tibetan healthy subjects that could serve as diagnostic...

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Autores principales: Shi, Xue-feng, He, Xiang, Sun, Ze-rui, Wang, Jian-xiang, Gu, Yu-hai, Xie, You-bang, Duo, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8888752/
https://www.ncbi.nlm.nih.gov/pubmed/35232961
http://dx.doi.org/10.1038/s41598-022-05592-2
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author Shi, Xue-feng
He, Xiang
Sun, Ze-rui
Wang, Jian-xiang
Gu, Yu-hai
Xie, You-bang
Duo, Jie
author_facet Shi, Xue-feng
He, Xiang
Sun, Ze-rui
Wang, Jian-xiang
Gu, Yu-hai
Xie, You-bang
Duo, Jie
author_sort Shi, Xue-feng
collection PubMed
description COPD is the fourth leading cause of mortality, and is predicted to be the third leading cause of death worldwide by 2020. But few studies on Tibetan COPD of China. This study identifies distinctive miRNA signatures in Tibetan COPD patients from Tibetan healthy subjects that could serve as diagnostic biomarkers or describe differential molecular mechanisms with potential therapeutic implications. In this study, a total of 210 differentially expressed miRNAs were screened. Analysis of the functions of target genes of differentially expressed miRNAs via GO enrichment analysis revealed that they mainly influenced guanyl-nucleotide exchange factor activity, cell morphogenesis and the positive regulation of GTPase activity. KEGG pathway enrichment analysis showed that these target genes were mainly enriched in signaling by NGF, Axon guidance, developmental biology, ubiquitin mediated proteolysis, and PDGF signaling pathways. MiR-106-5p and miR-486-5p expression was validated in the complete cohort. Age, plasma miR-106-5p, miR-486-5p, SP-D protein levels, and SP-D mRNA level were also determined to be correlated with FEV1%Pred, and may as the risk factors of Tibetan COPD. The combination of plasma miR-106-5p, miR-486-5p and SP-D mRNA expression may be the best model to assist the diagnosis of Tibetan COPD.
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spelling pubmed-88887522022-03-03 Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients Shi, Xue-feng He, Xiang Sun, Ze-rui Wang, Jian-xiang Gu, Yu-hai Xie, You-bang Duo, Jie Sci Rep Article COPD is the fourth leading cause of mortality, and is predicted to be the third leading cause of death worldwide by 2020. But few studies on Tibetan COPD of China. This study identifies distinctive miRNA signatures in Tibetan COPD patients from Tibetan healthy subjects that could serve as diagnostic biomarkers or describe differential molecular mechanisms with potential therapeutic implications. In this study, a total of 210 differentially expressed miRNAs were screened. Analysis of the functions of target genes of differentially expressed miRNAs via GO enrichment analysis revealed that they mainly influenced guanyl-nucleotide exchange factor activity, cell morphogenesis and the positive regulation of GTPase activity. KEGG pathway enrichment analysis showed that these target genes were mainly enriched in signaling by NGF, Axon guidance, developmental biology, ubiquitin mediated proteolysis, and PDGF signaling pathways. MiR-106-5p and miR-486-5p expression was validated in the complete cohort. Age, plasma miR-106-5p, miR-486-5p, SP-D protein levels, and SP-D mRNA level were also determined to be correlated with FEV1%Pred, and may as the risk factors of Tibetan COPD. The combination of plasma miR-106-5p, miR-486-5p and SP-D mRNA expression may be the best model to assist the diagnosis of Tibetan COPD. Nature Publishing Group UK 2022-03-01 /pmc/articles/PMC8888752/ /pubmed/35232961 http://dx.doi.org/10.1038/s41598-022-05592-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Shi, Xue-feng
He, Xiang
Sun, Ze-rui
Wang, Jian-xiang
Gu, Yu-hai
Xie, You-bang
Duo, Jie
Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients
title Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients
title_full Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients
title_fullStr Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients
title_full_unstemmed Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients
title_short Different expression of circulating microRNA profile and plasma SP-D in Tibetan COPD patients
title_sort different expression of circulating microrna profile and plasma sp-d in tibetan copd patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8888752/
https://www.ncbi.nlm.nih.gov/pubmed/35232961
http://dx.doi.org/10.1038/s41598-022-05592-2
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