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The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae)
Corylopsis sinensis Hemsl. is a deciduous shrub endemic to China, which is a valuable medicinal and ornamental species. In this study, we report the complete chloroplast genome sequence of C. sinensis, providing a genomic basis for future research. The chloroplast genome is 159,419 base pairs (bp) i...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8890515/ https://www.ncbi.nlm.nih.gov/pubmed/35252573 http://dx.doi.org/10.1080/23802359.2022.2044400 |
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author | Zhang, Haoyu Gu, Jiahao Chang, Hong |
author_facet | Zhang, Haoyu Gu, Jiahao Chang, Hong |
author_sort | Zhang, Haoyu |
collection | PubMed |
description | Corylopsis sinensis Hemsl. is a deciduous shrub endemic to China, which is a valuable medicinal and ornamental species. In this study, we report the complete chloroplast genome sequence of C. sinensis, providing a genomic basis for future research. The chloroplast genome is 159,419 base pairs (bp) in length, with a large single-copy (LSC) region of 88,152 bp, a small single-copy (SSC) region of of 18,701 bp, and two inverted repeat (IR) regions of 26,283 bp. The overall GC content is 38.0% and the chloroplast genome encodes 113 unique genes including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic results show that C. sinensis is sister to C. spicata. These results of C. sinensis will improve our understanding of the evolution of Corylopsis and Hamamelidaceae. |
format | Online Article Text |
id | pubmed-8890515 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-88905152022-03-03 The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae) Zhang, Haoyu Gu, Jiahao Chang, Hong Mitochondrial DNA B Resour Mitogenome Announcement Corylopsis sinensis Hemsl. is a deciduous shrub endemic to China, which is a valuable medicinal and ornamental species. In this study, we report the complete chloroplast genome sequence of C. sinensis, providing a genomic basis for future research. The chloroplast genome is 159,419 base pairs (bp) in length, with a large single-copy (LSC) region of 88,152 bp, a small single-copy (SSC) region of of 18,701 bp, and two inverted repeat (IR) regions of 26,283 bp. The overall GC content is 38.0% and the chloroplast genome encodes 113 unique genes including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic results show that C. sinensis is sister to C. spicata. These results of C. sinensis will improve our understanding of the evolution of Corylopsis and Hamamelidaceae. Taylor & Francis 2022-02-24 /pmc/articles/PMC8890515/ /pubmed/35252573 http://dx.doi.org/10.1080/23802359.2022.2044400 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Haoyu Gu, Jiahao Chang, Hong The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae) |
title | The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae) |
title_full | The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae) |
title_fullStr | The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae) |
title_short | The complete chloroplast genome sequence of Corylopsis sinensis (Hamamelidaceae) |
title_sort | complete chloroplast genome sequence of corylopsis sinensis (hamamelidaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8890515/ https://www.ncbi.nlm.nih.gov/pubmed/35252573 http://dx.doi.org/10.1080/23802359.2022.2044400 |
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